Corynebacterium renale: NCTC7448_00969
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Entry
NCTC7448_00969 CDS
T06893
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
crl
Corynebacterium renale
Pathway
crl03030
DNA replication
crl03430
Mismatch repair
crl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC7448_00969 (dnaX_1)
03430 Mismatch repair
NCTC7448_00969 (dnaX_1)
03440 Homologous recombination
NCTC7448_00969 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crl03032
]
NCTC7448_00969 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
crl03400
]
NCTC7448_00969 (dnaX_1)
Enzymes [BR:
crl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC7448_00969 (dnaX_1)
DNA replication proteins [BR:
crl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC7448_00969 (dnaX_1)
DNA repair and recombination proteins [BR:
crl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC7448_00969 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_22
DNAX_ATPase_lid
DnaX_C
AAA_30
RuvB_N
AAA_16
Trypan_PARP
AAA_19
AAA_14
AAA_28
AAA_18
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
SQI23246
LinkDB
All DBs
Position
1:1027558..1029681
Genome browser
AA seq
707 aa
AA seq
DB search
MSLYRKYRPASFAQVVGQEQVTVPLSNALDSGRINHAYLFSGPRGTGKTSSARILARSLN
CVHGPTSQPCGQCPSCVSLAPGGPGNLDVTELDAASHNGVDDMRELRDRAYYAPAESRYR
VFIIDEAHMISSAGANALLKVVEEPPEHLVFIFATTEPEKIIGTIRSRTHHYPFRLLTPQ
GMKQLLQRTVEAEGAYVEDSVYPLIIRQGGGSPRDSLSLLDQLLSGAGPDGLTYQAALPL
LGVTDLSLLDDTVTALANVDKPTLFSIIDDVIEEGIEPRRFVTDLLDRLRDLMVLQAVPD
ALESGLVDAPTDRADILREQAAMFTGPQITRLADEVNSRITDLRGATSPRLLLEILFAHL
VQPAAAPPAPVAASPQAAAHAAAATGTTNSEPAAKAARSGRVYGRRSQQQAGQAAAGAEQ
SRVEKAREMARQQAQASQPAQPQREPEPEPAQPAPQPQREPEPQAPAPEPQPEPKQESSE
LSDAEILDKVTQNWAQIRREVGTKARTAEIMMAEAKVLDFADNALTLGHTTGALAERLNA
DPNNAAIVQAVSHYAQREVGVHVVVGTQAARAPKPAPTPEPQPEPEPEPEPEPAPTWGEP
AKLGGQPQPPEPEPAPAPQPEQPAPRRRINVAEAVQRARQNKAREPEEVPLPPEPPGEDV
PPEDSFDQSEEAREMIEESQTPGHLDRRDAMSVAMDLLHKELGATPM
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgctgtataggaagtatcggccggcctcgtttgcgcaggtagttggccaagagcag
gttactgttccgctgtcgaatgcgttggatagtgggcggattaaccatgcgtatttgttt
tcggggccgcgggggacggggaagacgtcgtcggcacgcattttggcccggtcgctgaat
tgtgtgcatggtccgacgtcgcagccgtgcgggcagtgcccgtcgtgtgtgtcgctcgcg
ccgggtgggccgggcaatttggatgtgacggagttggacgccgcttcgcacaatggtgtc
gacgatatgcgtgagctgcgcgaccgggcttattatgcgccggcggagtcccgctaccgg
gtgttcatcatcgacgaggcgcacatgatttcctctgcgggtgcgaacgcgctgctcaag
gtggtggaggagccaccggagcacctggtttttatcttcgccacgactgagccggagaaa
atcatcggcacgatccgttcgcgtacccaccattacccgttccgcctgctcacgccgcag
ggcatgaagcagttgctgcagcgcaccgttgaggcggagggcgcgtacgtcgaggattcg
gtgtacccgctgatcatccgccagggtggtggcagcccccgcgactctctttccctcctt
gaccagctgctttccggcgcaggcccggatggtttgacgtaccaggcggcgctgccgctt
ttgggcgtgacggatttgtcgcttctcgacgacaccgtgactgccctcgcgaacgtcgac
aagcccacgctcttttccatcatcgacgacgtcatcgaagaaggcatcgaaccccgccgc
ttcgtcaccgacttacttgaccggctacgcgacctcatggtgctccaagccgtccccgac
gccctggaatccgggctcgtcgacgcccccaccgaccgcgccgacatcctccgcgagcaa
gccgccatgttcaccggaccgcagatcacccggcttgccgacgaagtaaactcccgcatc
accgaccttcgcggcgccacgtccccgcgcctcctcctggaaatcctgttcgcgcacctg
gtccagccggcggcagccccgcctgcaccggttgcggcctctccgcaggctgcggcgcac
gccgctgcagcgacgggcaccacgaattccgaacccgccgcgaaggccgcccgctccggg
cgcgtctatgggcgtaggtcccaacagcaggccggccaggcggccgcgggtgcggaacag
tcgcgtgtggagaaagcccgcgagatggcacgccagcaggcgcaagcctcccagccggcg
cagccgcagcgggagccggagccggaacctgcgcagccggcaccgcaaccgcaacgcgag
cccgaaccccaggctccagctcccgaaccgcagcccgagccaaagcaggaatcgtcggag
ctttctgacgcagaaatcctggacaaggtgacgcagaattgggcgcagattcgtcgtgaa
gtgggcacgaaggcacgcaccgccgagatcatgatggcggaggcgaaggtcctcgacttc
gcggacaatgcgctgacgctggggcacaccacgggcgcgttggcggaacgcctcaacgcg
gatccgaataatgcggcgatcgtgcaggcggtgtcgcattatgcgcagcgtgaggttggg
gttcacgtggtcgtcggcacgcaagcggcgcgagcgccgaaacctgcgcccacgccggaa
ccccagccagaaccggaacccgaaccggagcctgaaccggcgccgacgtggggcgaaccc
gccaaactaggcggccaaccccagccaccggagccggagccggcacccgcgccccaacct
gagcagcctgcaccgcggcgccgcatcaacgtggcggaggcggtgcaacgcgcccgacag
aacaaggcgcgcgagccggaagaggttcccctgccgcccgaaccgcccggcgaggacgtc
ccacccgaggacagtttcgaccagtcggaggaggcccgggagatgattgaggagtcgcag
acgccgggccacctggaccgtcgtgacgcaatgtcggtggccatggaccttctgcacaag
gagctcggcgctacgccgatgtag
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