Corynebacterium renale: NCTC7448_01029
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Entry
NCTC7448_01029 CDS
T06893
Symbol
topA
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
crl
Corynebacterium renale
Brite
KEGG Orthology (KO) [BR:
crl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crl03032
]
NCTC7448_01029 (topA)
03400 DNA repair and recombination proteins [BR:
crl03400
]
NCTC7448_01029 (topA)
Enzymes [BR:
crl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC7448_01029 (topA)
DNA replication proteins [BR:
crl03032
]
Prokaryotic type
DNA Topoisomerases
NCTC7448_01029 (topA)
DNA repair and recombination proteins [BR:
crl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC7448_01029 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
SQI23385
LinkDB
All DBs
Position
1:1085475..1088387
Genome browser
AA seq
970 aa
AA seq
DB search
MVKRLVIVESATKAKKIQPYLGDDYIVEASVGHIRDLPRGAADVPAKYKKEPWARLGVNT
DKDFEPLYVVSPDKKKKVADLKSKLKQVDELYLATDPDREGEAIAWHLLEVLKPKVPVRR
MVFNEITKPAILAAAENTRELDMDLVDAQETRRILDRLYGYEVSPVLWKKVMPRLSAGRV
QSVATRVIVERERERMAFISANYWDVLATVAKDLDFDARLTAVAGKRVATGRDFDDRGRV
KSDAVVVVDKQKAEAIASSLDDATLDVTNVEEKPYTRRPYAPFMTSTLQQEAGRKLHFTS
ERTMRIAQRLYENGHITYMRTDSTSLSKQGTEAARNQARELYGEAYVSPSPRNYDRKVKN
SQEAHEAIRPAGESFATPGQLAGQLDAEEFKLYELIWQRTVASQMTDAKGTSMKVTLTHE
ASEPVELSATGRTITFPGFLRAYSDAPAKDKDKAEAHLPQLAQGDTVQVKKVSAEGHSTN
PPARYTEASLVKKMEELGIGRPSTYASIIKTIQDRGYVMSRGNALVPSWVAFAVVGLLES
NFNELVNYDFTSSMEDQLDDIAAGEEDGTAWLNAFYFGDANADDNLAEAIARHGGLKSLV
NDNLEHIDARQVNSLHLCDDAEGRAINVRVGRYGPYLERQIGVTADGEPEYQRANLPEST
TPDELDLEAAEKLFATPQGGRELGENPDNGRMIVAKEGRYGPYVTEIVRDDERERAEAEA
EKVVAKERAEEDAQRAAEGKRAKNWDTKTAAKQKEKRIGEFVEESLKPKTASLFSSMEPA
TVTLEEALKLLSLPREVGVDPADGEVITAQNGRYGPYLKKGSDSRSLASEDQIFSITLDE
ARRIYAEPKRRGRAAAKPPLKQLGDNDVSGKPMSVKDGRFGPYVTDGETNASLRRGDTPE
TMTDARANELLSERRAKVAAEGGTKKASKRSTKKASKKATKKAAKKSTKKTVKKPPQTTK
RVVKAGTRKS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaagcgtttggtcatcgtcgagtcagcgacaaaggcgaagaagattcagccatac
ctgggcgacgattacatcgttgaagcttcggtgggccacattcgcgacctgccacgcggc
gctgcggacgtgcccgccaagtacaagaaggaaccctgggcgcgcctgggcgtcaacacg
gacaaggacttcgaacctctctacgtggtgagcccggacaagaagaaaaaggtcgcggac
ttaaagtccaagctcaagcaggtcgacgaactctacctggcaacagacccggaccgtgaa
ggcgaggccatcgcctggcacttgcttgaggtgctcaagcccaaggtgccggtgcgccgc
atggtgttcaacgagatcacgaagcccgccatcctggccgctgcggaaaatacccgtgag
ctggacatggacttggtcgacgcgcaggaaacccgccgcatcctggaccgcctctacggc
tacgaggtgtccccggtcctgtggaagaaggtcatgccacgcctttcggcgggtcgcgtg
cagtcggtggctacgcgcgtgatcgtcgagcgtgagcgcgagcgcatggcgttcatctcc
gcgaactactgggacgtcctggccacggttgccaaggacctggacttcgatgcgcgcctg
accgccgtcgcaggcaagcgcgtggccaccggccgcgactttgatgatcgcgggcgggtg
aagtcggatgcggtagtggtcgtcgataagcagaaagctgaggcgattgcttcttcgctt
gacgacgccacgctcgacgtcacaaacgtcgaggaaaagccctacacgcggcggccctac
gcaccgtttatgacctcgacgctgcagcaggaagccggccgcaagctgcacttcacctcc
gagcgcaccatgcgcatcgcgcagcgcctctacgaaaacggccacattacgtatatgcgt
acggactcgacctccctgtccaagcagggcaccgaagccgcccgcaaccaggcccgcgaa
ctctacggtgaggcctacgtttcgccgagcccacgcaactacgaccgcaaggtgaagaac
tcgcaggaagcgcacgaagccatccgtccggccggtgaatcgtttgccaccccaggccag
ctggccggccaactcgacgccgaagagttcaagctctacgaactgatttggcagcgcacc
gtcgcctcccaaatgaccgacgccaagggcacctcgatgaaggtcacgctcacacacgag
gcctccgaacccgtcgagctgtccgccaccggccgcaccatcacgttccccggcttcctg
cgcgcctactccgacgcccccgcgaaggataaggacaaagcagaggcgcacctgccgcag
ctggcgcaaggcgatacggtgcaggtcaagaaggtgtccgccgaaggccactccacgaac
ccgccagcccgctataccgaggcgagcctggtcaagaagatggaagaactgggcatcggc
cgcccatcgacctacgcgtcgatcatcaaaaccattcaggaccgcggctacgtcatgtcc
cgtggcaacgctctcgtgccctcgtgggtggcgttcgccgtcgtcggcctgctggaatcc
aacttcaacgaactggtcaactacgacttcacctcctccatggaggaccaactcgacgac
atcgccgccggcgaagaagacggcaccgcgtggctcaacgccttctacttcggcgacgcc
aacgccgacgacaacctggccgaagccatcgcccgccacggcggcctgaaatccctggtc
aacgacaacctcgagcacatcgacgcccgccaggtcaactccctacacctgtgcgacgac
gcagaaggccgcgccatcaacgtgcgcgtcggccgctacggcccctacttggaacgccaa
atcggagtcaccgccgacggcgaacccgaataccagcgcgccaacctgcccgaatccacc
accccagacgaactggacctcgaggccgcagaaaaactcttcgccaccccacagggcggc
cgcgaactcggcgaaaaccccgacaacgggcgcatgatcgtggcgaaggaaggccgctac
ggcccctacgtcactgaaatcgtgcgcgacgacgaacgcgaacgcgccgaagctgaagca
gaaaaagtggtggcgaaggaacgcgctgaggaagacgcccaacgcgccgccgaaggcaag
cgcgccaagaactgggacaccaaaactgctgccaagcagaaggaaaagcgaatcggcgaa
ttcgtcgaagaatcgctcaaacctaagacggcctccctgttctcctccatggaaccggcc
accgtcacgctggaagaagcactcaagctgctctctctgccgcgcgaggttggcgtcgac
ccggcagacggtgaagtcatcaccgcccaaaacgggcgctacggcccctacctgaagaag
ggctccgactcccggtccctggccagcgaagaccaaatcttcagcatcaccctcgacgag
gcacgccgcatttacgccgagcccaagcgccgcggccgcgccgccgctaagccgccgctg
aagcaactcggcgacaacgacgtctccggcaaacccatgtccgtcaaggacggccgcttc
ggcccctacgtcaccgacggggaaaccaacgcctcgctgcgccgtggcgacacgccagag
accatgaccgacgcccgcgccaacgaactactctccgagcgccgcgccaaagtcgccgcc
gaaggtggcacgaagaaggcctcgaaacgcagcaccaagaaggcctccaagaaggcgacg
aagaaagcggcgaagaagtctactaagaagacggtgaagaaaccgccacaaaccaccaaa
cgcgtggtcaaagctggcacccggaagagctaa
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