Corynebacterium renale: NCTC7448_01272
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Entry
NCTC7448_01272 CDS
T06893
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
crl
Corynebacterium renale
Pathway
crl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC7448_01272 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crl03021
]
NCTC7448_01272 (rpoA)
03400 DNA repair and recombination proteins [BR:
crl03400
]
NCTC7448_01272 (rpoA)
Enzymes [BR:
crl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC7448_01272 (rpoA)
Transcription machinery [BR:
crl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC7448_01272 (rpoA)
DNA repair and recombination proteins [BR:
crl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC7448_01272 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
SQI23818
LinkDB
All DBs
Position
1:1314045..1315067
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AA seq
340 aa
AA seq
DB search
MLISQRPEISEEYIDEARSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVKIDGVL
HEFTTIAGVKEDVSDIILNIKSLVLSSDSDEPVVMYLSKEGPGEVTAGDIQPPAGVEIHN
PDLHIASLNEQGRLEIEMVVERGRGYVPAATNSGGEIGRIPVDQIYSPVLKVSYKVETTR
VEQRTDFDKLILDVETKNSITARDAMASAGKTLVELFGLARELNTAAEGIEIGPSPEDSE
AIAAYSMPIEDLNFSVRSYNCLKRQEIHTVGELAECSETDLLDIRNFGEKSINEVKIKLA
SLGLTLKDAPEDFDPTQLEGYDEATGDYVDNDADDAEDSE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttatttcccagcgccccgagatcagcgaagagtacatcgacgaggctcgctcccgg
ttcgttatcgaacctctggagccaggcttcggctacactcttggcaactcgctgcgtcgc
accctgctgtcttccattcctggagcggctgtgaccagcgtaaagatcgatggtgtactg
cacgagttcaccaccattgctggtgtgaaggaagatgtttccgacatcatcttgaacatc
aagtccttggtcttgtcctctgactccgacgagccagtggtcatgtacctgtccaaggag
ggcccgggcgaggttaccgcaggtgacattcagccaccagcaggcgtggagatccataac
ccggatctgcacatcgcaagcctcaatgagcagggtcgcctcgagatcgagatggttgtg
gaacgtggccgtggctacgtcccagccgcaacgaactccggcggagaaattggccgcatt
ccagtcgaccagatttactccccagttctcaaggtgagctacaaggttgaaactactcgt
gtcgagcagcgtaccgactttgacaagctcatcctcgatgtcgagaccaagaactccatt
accgcacgcgacgccatggcgtccgcaggtaagactctggtagagctcttcggcctggcc
cgtgagctcaacaccgcagcagagggaattgagatcggaccgtccccagaggattccgag
gcaatcgcggcatactccatgccgattgaggacctcaacttctctgtgcgctcgtacaac
tgcctgaagcgtcaggaaatccacaccgtgggtgaactggccgaatgcagcgaaaccgat
ctgctagacatccgcaactttggtgagaagtccatcaacgaagtcaagatcaagctggct
agcttgggcctgaccctgaaggacgctcctgaagactttgaccccacccagctggaaggc
tacgacgaagccaccggcgattacgtggacaatgacgcggatgatgcggaagattccgag
taa
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