Corynebacterium renale: NCTC7448_01413
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Entry
NCTC7448_01413 CDS
T06893
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
crl
Corynebacterium renale
Pathway
crl03420
Nucleotide excision repair
crl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC7448_01413 (pcrA_2)
03430 Mismatch repair
NCTC7448_01413 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crl03400
]
NCTC7448_01413 (pcrA_2)
Enzymes [BR:
crl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC7448_01413 (pcrA_2)
DNA repair and recombination proteins [BR:
crl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC7448_01413 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
NCTC7448_01413 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
AAA_11
ADDB_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
SQI24242
LinkDB
All DBs
Position
1:1466755..1468806
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AA seq
683 aa
AA seq
DB search
MFDINDLDQDQLVAATAPRGPVCILAGAGTGKTRTITHRIAHLIQQGFVGQNRVLAVTFT
SRAAGEMRDRLQAMGIGGVQARTFHAAARRQLRYFWPQVAGDLPWKLIDNKFPLVGRAAR
SVGVGSTTENVRDLLGEIEWAKASLISADQYAEAVDKHDRTPPESPAKVAEVYRRYEKQK
TSPEGMLLDFDDLLLHTAAAIENSTAVAEEFRHQYRTFVVDEYQDVTPLQHRLLQAWLGQ
RDDLTVVGDANQTIYSFTGASPEFLLNFSRDYPHATTVKLQRDYRSTPQVTELANTVIDQ
ASGRLAGTRLELIGMRPNGPEPEYHGYDDEPTEAREVAGKILTLLDAGVPASEIAVLYRI
NAQSAEFEQALSDAGIVYQVRGGEGFFQRAEIKQAMTQIVRAAQAGTVPGGTVAQQVRAI
LAPLGLTEREPEGAQARERWQLLGAVADLAEDLTATVPDLDLHGFIREMQRRAESRQPPT
VEGVTLASLHAAKGLEWDAVFLVGLVEKTLPISHAIKAGDKQIEEERRLFYVGITRAREH
LFLSWSRARQEGGRASRERTRFLDKVLPEPEITDVKPRSKRPSRCRVCGRPLHSATEKTL
GRHEDCPSGMDEAVFEALRQWRLSVARELDVATYMIFTDATLVAIAEDMPENERDLLNIP
GIGPAKLQEFGPQLLEFLAQYQH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacatcaatgatcttgaccaagaccagttggtagcagctactgcaccacgcggc
cccgtctgtattttggccggcgccggcaccggtaaaacacgcaccatcacgcaccgcatc
gcccacctcatccagcagggcttcgtcgggcagaatcgggtgctcgcggtgacgtttact
tcccgggccgcgggtgaaatgcgggaccggcttcaggcaatggggatcggcggggtgcag
gcgcgtactttccacgcagctgcccgccgccagttgcgctacttctggccccaagtagca
ggtgacctgccatggaaattgattgacaacaaattccctttggtcggccgtgctgcgcgc
agcgtaggggtcggttccactacagaaaacgtgcgtgacctcttgggcgaaattgagtgg
gcgaaggcgtccttgatttctgcggaccagtacgcggaggcggtagacaagcacgatcgc
acaccaccggaaagcccagccaaggtagcggaggtgtaccgccggtatgaaaagcaaaag
accagcccggaaggtatgctcctagactttgacgacctgttgttgcacacagcagccgcg
attgagaactccacggccgtcgccgaggaattccggcaccaatatcgcacgttcgtcgtc
gacgaataccaggacgtcactcccttgcagcatcgtctactgcaagcctggttggggcag
cgcgacgaccttaccgtggtcggcgacgcgaaccagaccatttattctttcacgggtgcg
agccccgagttcttgctgaacttttcccgcgattacccgcatgcaacaacggtcaaactc
cagcgagactatcgctccaccccgcaggttaccgaactagcaaacacggtcatcgaccaa
gccagtggccgcctggcaggcacacgcctagaacttatcggtatgcgccccaatggccca
gaacctgagtaccacgggtacgacgacgaacccacagaagccagggaagtagccggcaag
attctcacgcttctcgacgccggagtgcccgcctctgaaattgcggttctctaccgaatc
aacgcgcaatcagcggaattcgagcaggcactctccgatgccgggatcgtgtaccaagtc
cgcggcggggaaggcttcttccagcgcgctgagatcaagcaggccatgacccagattgtg
cgcgctgcccaagccggcactgttcctggaggaacagtcgcccagcaagttcgtgcaata
cttgcgcccctaggcttaaccgagcgtgaacccgaaggtgcgcaagcccgcgaacgctgg
caactgctcggcgccgtagcagacctcgctgaagacctcacagccacggtcccagacttg
gacctgcacggtttcatccgtgagatgcaacgccgcgccgaatcacggcaaccaccgact
gtcgaaggcgtgaccctcgccagcctgcacgccgccaagggcttggagtgggacgccgtg
ttcctcgtggggttggtggaaaaaaccctaccgattagccacgctataaaggctggcgat
aagcagatcgaagaagaacgccgcctcttctacgtaggtatcacacgtgcccgcgaacac
ctcttcctgtcctggtcacgggctcgccaagaaggtgggcgtgccagccgcgagcgcact
cgttttctggacaaagtactacccgaaccagaaatcaccgacgtgaaaccacggtccaag
cgacccagccggtgccgcgtctgcggccggccactacactccgccacagaaaagactctc
ggccgccacgaagactgtccttccggaatggatgaggccgtgttcgaagccttgcgccaa
tggcgcctgagcgttgcccgcgaactcgacgtggctacgtacatgatcttcaccgacgca
acactggtagccatcgcagaagatatgccagaaaacgagcgtgacctgctgaacatccca
ggaattgggccggctaagttgcaggagtttggcccgcagttgctggaatttcttgcgcag
taccagcactaa
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