KEGG   Corynebacterium renale: NCTC7448_01483
Entry
NCTC7448_01483    CDS       T06893                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
crl  Corynebacterium renale
Brite
KEGG Orthology (KO) [BR:crl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crl03400]
    NCTC7448_01483
Enzymes [BR:crl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NCTC7448_01483
    5.6.2.6  RNA 3'-5' helicase
     NCTC7448_01483
DNA repair and recombination proteins [BR:crl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NCTC7448_01483
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII DUF6406 Lhr_WH AAA_30 PhoH DUF5805 AAA_25
Other DBs
NCBI-ProteinID: SQI24462
LinkDB
Position
1:1541133..1545944
AA seq 1603 aa
MTDTHILQKFRPQVATWFADVFAAPTAVQAAAWESISAGENALVIAPTGSGKTLAAFLWA
LNSLVEAEGQTVLPAAEPAEMTAAEKGRGVKVLYISPLKALGVDVEHNLRAPLQGIARAA
QRMGLPEPNVTIGVRSGDTPSAERARQLRRPPDIMITTPESAYLMLTSKAAGILRDVDTV
IIDEIHALAGTKRGVHMALTLERLARVAGDFQRIGLSATVRPPRTVAQFLGGDRPVQIID
PPAEKKWTLDVHGVVPDMADLPTPEPGSTIGEMTIDDPSGLSALGPLEPLDPEATDIEPY
APAQKSIWPFIEQDVYKHVMQARSTLIFVNSRRTAERLTSRINELYASEHDPEALARPSR
RDPAQLMKQIDTVGHAPAIIARAHHGSVSKDERALTETMLKEGTLKAVVATSSLELGIDM
GAVDLVINVESPPSIASGLQRVGRAGHGVGEVSRGAFYPKHRADLVQTTVTVEQMRAEEI
EAISVPRNPLDVLVQQTVAAVAMEDLDVDDWFDTVRRAFPYRDLARDVFDAVIDLASGVY
PSTDFAELKPRVNFDRVTGVLSARPGAQRVAVTSGGTIPDRGMFGVFLVGSESGSAPRRV
GELDEEMVYESRVGDVFTLGASSWRIEDITRDQVLVTPAPGHTGRLPFWNGDQAGRPAEL
GAAIGAFRRHVSAAEPDVVATRLRAAGLDQWAADNVVAFLNEQRAATGVVPDEKTLVLER
FKDEVGDWRVVLHSPYGRGVNAAWALAVGARVAAETGMDPQAVAGDDGIVIRLPEGEAEP
GAHLFTFEVDEIADLVTEHVGGSALFASRFRECAARALLLPRRNPGKRAPLWQQRQRAAQ
LLDVARNYPSFPIILETVRECLQDVYDVPALTELMGALGNHSVRVAEVTTEQPSPFASTL
LFNYTGAFMYEGDTPLAEKRAAALALDPALLAKLLGEVELRELLEPEIVRETHEQLQRTA
AGRQARTVEELIDALRILGPIPVAELTAHTTWPTPAADALREASDRVMEVRIAGVEHLAV
QLDAPLLRDGLGVPVPPGVPAQVAPVTDAADQLVSRWARTRGPFVLADLVEAFGLAPSVA
ARLLDRDDIIEGHYRQGIDEQEYCNKDVLSVIRRRSLARARSQMQPVSHSALARFQAQWN
NVAPVGTDPELAGVDGTFMAIEQLAGVRLPASAWESVVLPQRVVGYQPAYLDELTSSGEV
LIVGAGSAGAGDPWLMLLPADYAPQLMRQVETSLSVLEERVMELLAGGGGFLFSDLKAAL
TVETDDDLRAALWALCEKGLVAPDSFARVRDHLVSGHGTRAHRARRTPARGRLRMGRTSF
AQSQRAGAHTPSDVLGRWSALPAAATDATQRGIAHGEAWLDRYGVVTRGSVVSEDVVGGF
ALAYKVLSSFEDNGQAMRGYFVEGLGAAQFSTRAVVDRLRGLDDSPDVGGWPSGTDTPAV
YVLAAADPANPYGAALPWPETGPTRGAGALVVLIDGLLLAHLTRGGKTLRIFDHTLPRSD
VDAPHIIVEALKNVISKNWLKPVNIEKINGEPALSSPYLESFREAGAKMTPRGIKVLTSS
QSAPTRNGRSLSEALAESEFTQVDGGKSATPFKARTRGRRGRR
NT seq 4812 nt   +upstreamnt  +downstreamnt
ttgacggatacgcacattttgcagaaatttcgaccccaagtggcaacctggtttgctgac
gtgttcgccgcaccaacggcggtccaggccgccgcgtgggaaagtatttctgcaggtgag
aatgcgctcgttatcgcgccgacaggttccggtaaaacgctagccgcgttcctgtgggca
ctcaattctttggtggaggcggaagggcaaactgttttgccggccgcggaacccgccgag
atgaccgccgccgaaaaggggcgcggcgtcaaagtcttgtatatctcgccgctgaaggct
ttgggcgtggacgtcgagcacaatctgcgtgcaccgttgcaggggattgcgcgtgctgca
caacgaatggggctcccggagccgaacgtgacaatcggtgtgcgctctggtgatacgccg
tcagcggagcgtgcgcgtcagctgcgtcgcccgccggacatcatgatcacgacccctgag
tcggcgtacttgatgctcacctccaaggcggcggggattttgcgcgatgtcgataccgtg
atcatcgacgaaatccacgcgctcgccggcaccaaacgtggcgtgcacatggcgctcaca
ctggaacgcctggcgcgcgttgccggtgatttccagcgcatcggtttgtccgctacggtc
cgcccaccgcgtacggttgcacagttcctcggcggagaccgtcctgtccagatcatcgac
ccgcccgcggagaaaaagtggacgcttgacgtgcacggcgttgtacccgacatggcggat
cttcccaccccggaaccaggttccacgattggtgagatgactatcgacgacccgtccgga
ctatcggccttagggccgttggaaccacttgaccccgaggccacggacattgaaccgtac
gccccggcgcagaagtccatttggccgttcatcgagcaggacgtgtacaagcacgtcatg
caagcacgttcgacgctgatcttcgtcaactcgcggcgcacggcggaaaggttgacgtcg
cggatcaacgagctctacgcctccgagcacgatccagaggccttggcgcgcccatcacgg
cgggaccccgcgcagttgatgaagcagatcgataccgtaggccacgccccggcgataatt
gcgcgtgcacatcacggttctgtgtccaaggatgagcgcgcgctcaccgaaacgatgctc
aaggaaggcacgctgaaagcggtggtggcgacctcctcgctggagctaggcatcgatatg
ggcgccgtggacctggtgataaacgttgaatcgcctccgtcgattgcttctggcctgcag
cgcgtggggcgcgccgggcacggggtgggcgaggtgtcgcgcggtgctttctatcccaag
catcgcgcggacctggtgcaaaccaccgtgacggtggagcagatgcgcgccgaggagatc
gaggcgattagtgttccgcgtaatccgttggatgtgctcgtgcagcagacggtggcggcc
gtcgcgatggaagacctggacgtggacgattggtttgataccgtgcgccgcgcgttcccg
taccgcgatctggcgcgtgacgtgtttgacgccgtcatcgatttggccagcggcgtgtac
ccgtcgacggattttgcggagcttaagccgcgcgtgaacttcgaccgggttactggtgtg
ctgtcggcacggccgggtgcgcagcgtgtggcggtcacttcgggtggcacgattccggac
cgcggcatgtttggggtgttcctcgtcggttcagaatctgggtctgcaccgcggcgtgtt
ggtgaacttgatgaggagatggtctacgagtcgcgcgtcggcgatgtgttcacgctgggg
gcgtcgtcgtggcgcatcgaggacattacccgcgaccaggtgctggtcacgcccgcgccg
gggcacacggggcgcctgccgttctggaatggtgaccaggccggtcgtcccgcggagctc
ggcgcggcgattggtgcttttcgacgtcacgtttccgccgccgaaccggatgtcgtggcc
acacgcctacgcgctgctggcctggatcagtgggcggctgacaacgtcgttgcgttcttg
aacgagcagcgcgcagccacgggcgtagtccctgatgagaaaaccctggtactagagcgg
ttcaaggatgaggtgggggactggcgcgtcgttttgcacagcccgtacggccgtggcgtg
aatgcggcgtgggcgctcgcggtgggcgcgcgtgtggctgcggaaacgggcatggacccg
caagctgtggccggcgatgacggcatcgtgatacgcctgcccgagggtgaagccgaaccg
ggtgcgcacctgttcacgttcgaagtagatgagatcgcggacctggtgactgagcacgtc
ggcggttcggcgttgttcgcgtcgcggtttcgcgaatgcgctgcacgtgcgctgttgttg
ccgcgccgcaacccaggcaagcgtgcgccgttgtggcagcaacgccaacgtgcagcgcaa
cttttagacgtggcccgcaattaccccagtttccccatcattctggagacggtgcgcgaa
tgtttgcaggacgtgtacgacgttcccgcgctcaccgagctgatgggagctttgggaaat
cactccgtacgcgtggcggaagtgaccacggagcagccgagcccgttcgcttcgacgctc
ctgttcaactacacgggtgcgttcatgtacgaaggcgacaccccgctagcggagaagcgc
gcggctgcgttggcgctagacccggcgttgttggcgaagctgctcggcgaggtggagcta
cgcgagctgctcgagccggaaatcgtccgcgagacacacgaacagttgcagcgcacggca
gcaggccgccaggcccgtaccgttgaggagcttatcgacgccctgcgcatcctcggcccc
attccggtggcagaactcaccgcgcacaccacgtggccaaccccagctgctgatgcgtta
cgcgaggccagcgaccgtgtcatggaagtgcgcatcgcaggtgtggagcatcttgcggtg
cagctcgacgcaccgctgctgcgcgacggcctcggcgtgccggtaccgccgggagtgccg
gcccaggttgcgcccgttacggatgcggctgaccagctggtgagccggtgggcgcgtacg
cgcgggccattcgtgctagctgaccttgtggaggccttcggtttggcgccgtcggtggca
gcacgtctactcgaccgcgatgacattatcgaaggccactaccgccaaggcatcgatgag
caggaatactgcaacaaggacgtgctcagcgttatccggcggcgcagtctggcgcgggcg
cgcagccagatgcagccggtcagccacagtgccttggcgcggttccaagcgcagtggaac
aacgtggcacctgttggaaccgacccggaacttgccggcgtggacggaacgttcatggcg
attgaacagctcgcgggcgtgcgtctgccggcttcggcgtgggagtcagtggtgttgccg
cagcgtgtggttgggtatcaaccggcgtatttggacgagctcaccagttctggcgaagtg
ctcatcgtgggtgctgggtcagcgggggcgggggacccgtggctgatgttgttgccggct
gattatgcgccgcagcttatgcggcaggtggagacgtcgttaagcgtcctggaggagcgc
gtcatggagctgcttgccggcggcggaggcttcctgttcagtgacctgaaggctgctctc
actgtggagactgacgacgacctgcgcgcagcactgtgggcgctgtgtgaaaaagggctc
gtggcacctgatagtttcgcccgggtgcgtgaccacctggtgagcggtcacggaacgcgt
gctcatcgagcgcggcgcacgccggctcgcggtcggctgcgtatggggcgcaccagcttt
gcacaatcgcaacgcgccggagcgcacacgcccagcgacgtactcggccgctggtccgcg
ctgccggcagccgcgaccgacgcaacgcaacgcggcatcgcgcacggggaagcgtggctt
gacaggtacggcgtggtcacgcgcggttccgtggtcagcgaggacgtagtcggcggcttc
gcgctggcgtataaagtgctgagctcattcgaagacaacgggcaagcgatgcgcggctat
tttgtggagggcctcggcgcggcccagttttctacccgcgcggtggtcgaccggttgcgt
ggcctcgacgacagtccggacgtcggcgggtggccgtcgggcacagacaccccggctgtt
tacgtgctcgccgccgcagacccagcgaacccctatggtgcggccttgccgtggccggag
accggaccgacccggggtgccggcgccctggtcgtgcttatcgacggcctcctgctcgcc
cacctgacccgtggcgggaagacgctgcgcatctttgaccacacgttgccacggtcggat
gtggatgcgccacacatcattgtggaagcgctgaagaatgttatttctaagaattggctt
aaacctgtgaatatcgaaaagattaacggtgagccggcgctctcctctccttacctcgaa
tctttccgtgaagcaggcgctaaaatgacgccgcgcggcattaaggtgttaacttcgtca
caaagtgcgccgacacggaacgggcgctccctgagcgaggccttagcggaatctgaattt
acacaggtagatgggggtaaaagtgctactccatttaaggcccgcacccgcggccgaaga
ggccgcaggtaa

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