Corynebacterium renale: NCTC7448_01487
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Entry
NCTC7448_01487 CDS
T06893
Symbol
pcrA_3
Name
(GenBank) ATP-dependent DNA helicaseII
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
crl
Corynebacterium renale
Pathway
crl03420
Nucleotide excision repair
crl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC7448_01487 (pcrA_3)
03430 Mismatch repair
NCTC7448_01487 (pcrA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crl03400
]
NCTC7448_01487 (pcrA_3)
Enzymes [BR:
crl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC7448_01487 (pcrA_3)
DNA repair and recombination proteins [BR:
crl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC7448_01487 (pcrA_3)
MMR (mismatch excision repair)
Other MMR factors
NCTC7448_01487 (pcrA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
CarD_TRCF_RID
ResIII
DUF4709
Motif
Other DBs
NCBI-ProteinID:
SQI24466
LinkDB
All DBs
Position
1:1549044..1551458
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AA seq
804 aa
AA seq
DB search
MDNVAENPFTNDPGAALVAGLNPQQRQAVEHIGSPLLIVAGAGSGKTAVLTRRIAYLMQV
RGVHPGQILAITFTNKAAAEMRERVTTLVGPVAQRMWVATFHSVCVRILRQQAALVPGLN
TNFTIYDADDARRLLSMIAKDHNLDLKKFTARTLANAISNHKNELTSPQEALAAAEATHN
PFESTVAQVYAEYQKRLRQANALDFDDLIGEVVRIFREHPQVADYYRRRFRHVLIDEYQD
TNHAQYELASTLVGRGPEASELCVVGDSDQSIYAFRGATIRNIEEFERDFPNAQTIVLEQ
NYRSTQTILDAANAVISRNENRRAKKLWTALGEGEQITGYVADNEHDEARYIASQIDELA
DGGMSYSDMAIMYRTNNSSRAIEDIFIRSGIPYKVVGGTRFYERMEIRDLVAYLKVLANP
EDTVSLRRIVNTPKRGIGDRAIAMVNLHAENHGIGFGAALRDAAAGEVNLLGTRGQKAIG
GFVAMMDDIRAVQDELVHEDTGLPDLGELINHILDVTGYRAQLEASNDPQDGSRLDNLNE
LVSVAREFTTDAAHQLAYAGMDGSDAVAAAAAEGEPEPGSLNAFLERVSLVADADQIPDS
EQGVVTLMTLHTAKGLEFPVVFLIGWEDGQFPHLRALGDPTELAEERRLAYVGLTRARQR
LFVTRAMARSAWGNTVTNPASRFLADIPEHLVNWEREEPQPSWSDSWSSGWSGASAPRSD
SWQHPQSTGASRTRTRRGPQKSAGGTQAAKLNLAVGDKVNHDKYGVGTVVAVDGLGKHST
VTIDFGSKGTVRLMLIGNVPMEKL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgtcgcagaaaatccgtttactaacgaccccggagccgcgctcgtcgcaggc
ctgaacccccagcaacgccaagctgttgaacatatcggcagcccgttgcttatcgtcgcc
ggtgctggttccggcaaaaccgcggtgctcacccggcgcatcgcctatctcatgcaggtc
aggggagtgcacccgggccagattttggcgattacctttactaacaaggccgccgcggaa
atgcgcgagcgcgtgacaaccctcgtggggccggtggcgcagcgcatgtgggtggccacg
ttccactcggtgtgtgtgcgaatcctgcgccagcaggcagcactggtcccgggtttgaat
acgaacttcacgatctacgacgccgacgatgcccgtcgtctgctgtccatgatcgccaaa
gaccacaacttggacttgaaaaagttcaccgcgcgcacgttggccaacgcgatttcgaat
cacaaaaatgaactcacctccccgcaggaggcattggctgcagccgaagcgacgcacaat
cctttcgaaagcactgtcgcgcaggtctatgccgaatatcagaagcgcctgcgccaggcc
aacgccttggacttcgatgacttaatcggcgaagtggtacgcattttccgcgagcacccc
caggtcgcggactattaccgtcgccgcttccgccatgtgcttatcgacgaataccaggac
accaaccacgcccagtacgaattagcctccacgctcgttggccgtggccctgaggcctct
gagttgtgcgtggtgggcgactccgaccagtctatttacgccttccgcggtgccacgatc
cgtaatattgaggaattcgagcgcgacttcccgaacgcccaaaccatcgtcctggagcag
aactatcgttccacacaaacaattttggacgcggctaacgcggtcatctcccgcaacgaa
aaccggcgggcgaaaaaactatggacggccctcggcgaaggggagcagatcacaggctac
gtcgccgacaacgagcacgatgaggctcgctacatagcgtcccagatcgatgaactcgcc
gacggcggcatgtcctattccgacatggcgatcatgtaccgcaccaacaattcctcgcgc
gcgatcgaagatattttcatccgctctggtatcccgtacaaagtcgtcggcggtacgcga
ttctacgagcgcatggagatccgcgatctcgtggcttacctcaaagttttggcgaaccct
gaggacactgtttctttacgacggatcgtcaacaccccgaagcgcggaatcggggaccgg
gcgattgctatggtcaacctccacgccgaaaaccacggcatcggcttcggtgcagcgcta
cgcgacgcagccgccggcgaagtcaacctcctcggcacgcgcggccagaaggccatcggc
ggtttcgttgccatgatggacgacatccgtgctgtccaagacgaactcgtccacgaagac
actggcctgccagacttaggcgaactgattaaccacatcctcgacgtgaccggctaccgt
gcccagctcgaggcatccaacgacccgcaggatggctcgcgcctagacaacttaaatgag
ttggtctccgttgcccgcgagttcaccactgatgcggcccaccagcttgcctacgcgggc
atggacggatccgacgcggttgccgcagccgccgcagaaggggagcccgagcccggcagc
ctaaacgcgttcttggagcgcgtgtccctggttgccgatgcggaccaaatcccggacagc
gaacaaggcgtggtcaccctcatgacgctgcacaccgcgaaaggtctggaattccccgtc
gtgttcctcatcgggtgggaggacggacagttcccgcacctgcgcgcactcggcgatccc
acggagcttgccgaagaacgtcgcctcgcctacgtgggtctaacacgtgcacgtcagcgg
ttgttcgtcacccgcgcgatggctcgctccgcgtggggcaacacggttactaacccggca
tcgcgcttcttggccgatatccccgaacacttagtgaactgggaacgcgaagaaccacaa
ccatcatggtctgactcctggtcgagcggctggtcgggtgcgtctgccccgcgctctgat
tcgtggcaacatccacagtccactggagcttcgcgtacccgcacgcgccgtggtccgcag
aagtctgccggcggtacgcaggccgcgaaactgaacctagcggttggggataaggtcaac
cacgataagtacggggtgggcaccgtggtcgcggtcgatggcctaggtaagcattccaca
gtgaccatcgattttggttcgaaagggaccgtgcgcctgatgcttatcgggaatgtgccg
atggagaaactctag
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