Corynebacterium renale: NCTC7448_02109
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Entry
NCTC7448_02109 CDS
T06893
Name
(GenBank) Ribonuclease j Rv2752c
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
crl
Corynebacterium renale
Pathway
crl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC7448_02109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crl03019
]
NCTC7448_02109
Messenger RNA biogenesis [BR:
crl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC7448_02109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
DUF459
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
SQI26247
LinkDB
All DBs
Position
1:complement(2200791..2202905)
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AA seq
704 aa
AA seq
DB search
MTESRNRSRKVTRKSGSPEARDAAPVFQAPDANTTESADTRAAHNADAGDSRNHSGEKHT
EKSEKSEKQNNSQRGRRGGDSNNESGRSRSRGGRSRGGRGSRGNGGNGGNHGNRRNPVKS
MQGADLTKRLPAPPKAPKNGLRIYALGGISEIGRNMTVFEYNGRLLLVDCGVLFPSSGEP
GVDLILPDFGPIEKKLHLVDALVITHGHEDHIGAIPWLLKLRKDIPILASRFTAALIQAK
CQEHRQRPNLIEVNENSEENRGPFNVRFWNVNHSIPDCLGIVIKTGAGQVVMTGDIKMDQ
TPIGGKPTDLPALSRYGDEGVDLMLVDSTNATTPGFSPSEAEIGPTLKRLVKDAKQRVIL
ASFASNVYRVQAAVDAAVEAGRKVAFTGRSMIRNMEIAEKMGYLKAPRGTIVTMDEASKM
AGHKVLLITTGTQGEPMAALSRMARREHRQITVRQGDLIILSSSLVPGNEEAVFGVINML
AQIGATVVTGKDARVHTSGHGYAGELLFLYNCARPKNVMPVHGEWRHLRANKELAISTGV
RRDHTVLAQNGVVVDLVNGRAKVVGQLPVGHLYVDGTTMGEVDSDVLADRTSLSEGGLIN
ITAVIDNRTSRLLETPTVETRGYSDNDKDMVPQVRELVEKVMNDLAAEGENDPYRMVQQL
RRKVSRFVEQKWRREPMILPTVVPMTGDIDHNDDSDVQNSRESQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcccgtaaccgttcccggaaggtcacccgcaagtcagggtcaccggaagcc
cgggacgcagctccggtattccaagcaccggacgctaacaccacggagtctgccgacacc
cgcgctgcacacaatgcagacgcgggtgattcgcgtaatcattccggggaaaagcacact
gaaaaatctgagaagtccgagaaacagaataattctcagcggggacgccgtggtggcgac
tccaacaacgagagtggccgctcccgctcacgcggtggacgttcccgcggtggccgaggc
tcccgtggaaacggtggcaatggtggtaaccatggcaatcgccgtaacccagtgaagtcc
atgcagggcgcagacctgaccaagcgactgcctgcaccacctaaggcaccgaagaacggc
ctgcgtatctacgcactcggcggtatctccgaaatcggtcgtaacatgaccgttttcgag
tacaacggtcgcctcctcctcgtagactgtggcgtgctcttcccatcctcgggcgaacca
ggcgtggacttgatcctccccgacttcggtccgattgagaagaaactgcacctcgttgat
gcactcgtgatcacacacggacacgaagaccacatcggtgccatcccgtggctgctgaag
ctgcgcaaggatatcccaatccttgcctcacgcttcaccgcggcgctcatccaagctaag
tgccaggaacaccggcagcgtccgaacctcattgaagtcaacgaaaattccgaggaaaac
cgcggcccattcaacgttcggttctggaatgtaaaccactccatccctgattgcctcggc
atcgtgattaagaccggtgcaggccaagtggtcatgaccggtgatatcaagatggaccag
acccctatcggtggcaagcccactgatttgcctgcactgtcccgttacggcgacgaaggc
gtggacctgatgcttgtggactctacgaatgccacgactccaggcttctcgccgtcggaa
gccgaaatcggtcctacgcttaagcgccttgtcaaggatgccaagcaacgcgtcattttg
gcgtccttcgcatcgaatgtgtaccgcgtgcaggctgctgtggatgcggcggtggaagcg
ggtcgaaaggttgctttcactggccgttccatgattcgcaatatggaaattgcggagaag
atgggttacctgaaggctccccgtggaaccattgtcaccatggacgaggcttccaagatg
gcgggccacaaggtccttctcatcactaccggaactcagggcgagccgatggctgcgctg
tcacgcatggcgcgtcgtgagcatcgtcagattacggtgcggcaaggtgacctaatcatc
ctttcttcgtctctcgttccgggtaatgaagaagctgtattcggtgtcatcaacatgctc
gcgcagattggtgcgactgtagtcactggtaaggatgctcgcgtccacacttcaggccat
ggttacgctggcgagttgctattcctgtacaactgcgcccggccgaagaacgtcatgcct
gttcacggcgagtggcgccacctccgtgcgaacaaggaactagctatttctactggcgtg
cgtcgcgaccacacggtgttggcacaaaatggtgttgtggttgaccttgtcaacggccgt
gcaaaggtcgtaggccaactcccagtcggacacctgtacgtcgatggcaccacgatgggc
gaggtcgatagtgatgttcttgcagaccgaacctcgctgtctgaaggtggtctcatcaac
atcaccgcggttatcgacaaccggacctcgcgtctgcttgagactccgacggtggaaacc
cgcggttactcggacaacgataaggacatggtcccgcaagtacgcgagctcgtggaaaag
gtcatgaatgatctcgcagccgaaggggaaaatgacccataccgtatggttcagcagctg
cgacgcaaggtctcacgctttgtcgagcagaagtggcgtcgtgagccaatgattctgccg
acggtcgttccgatgaccggagacattgatcacaacgatgattccgatgtccagaactca
cgagagtcccaataa
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