Paracrocinitomix mangrovi: K6119_00080
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Entry
K6119_00080 CDS
T07876
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
crm
Paracrocinitomix mangrovi
Pathway
crm03030
DNA replication
crm03430
Mismatch repair
crm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6119_00080
03430 Mismatch repair
K6119_00080
03440 Homologous recombination
K6119_00080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crm03032
]
K6119_00080
03400 DNA repair and recombination proteins [BR:
crm03400
]
K6119_00080
Enzymes [BR:
crm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K6119_00080
DNA replication proteins [BR:
crm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K6119_00080
DNA repair and recombination proteins [BR:
crm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K6119_00080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DUF7508
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
UKN01912
LinkDB
All DBs
Position
complement(23454..24827)
Genome browser
AA seq
457 aa
AA seq
DB search
MKYAIVDIETTGDKPINFKVIEIAIILHDGKREIDRYSTLVNPEERISPFIARLTGIHDS
DVANAPKFYEVAKEIVEFTAGAVFVAHNVSFDYGVIRREYRRLGYDFRLPHLCTVQTSRI
LLPGHKSYGLKNITKALNIPLNGHHRAINDTEATAKLFEMLYEKDESNELQTFIKKEINP
KVLHPSLDLDKLDEIPNKTGIYRFYNDKNELIYIGKSIHIRTRVEQHLKNSKTKKALEMR
EVIADISYELTGSELIALLKESDEIKKHQPVYNRAQRTNLFTHGLYLHKDQRGYMNLVVK
KNVPAGHPIMTFTSIQNGKKYLEFWQEEFQLCQRLCGLHTGASACFKYNIKECNGACIGE
EDVEEYNKRVESLIDDLNFKGDSFLITDKGRNSGEYGFVLIKDGQYAGYGFIPRYQLARR
KENFTKHLRKKKSNRDFQSIIKMQLHKNSKLDIHHLD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtacgcaatagttgacatagaaacaacaggtgataaaccaattaattttaaagta
attgagattgctatcatattgcatgatggtaaacgagagattgacagatattcaacattg
gtgaatcctgaagaaagaatttctccttttattgcaagacttaccggtattcatgattca
gatgttgccaatgcaccaaagttttatgaagtcgccaaagaaatagtagaatttaccgca
ggagctgttttcgtggcgcataatgtgagttttgattacggtgtaattagaagggaatat
agacgacttggttacgactttagactgccccatttatgtacagttcaaacttcaagaatt
ttactcccgggacataaatcttatggtttaaaaaacatcactaaagctttaaacattcca
ttaaatggtcatcatagagcaattaatgacacagaggctacagccaagctgtttgaaatg
ctttatgaaaaagatgaaagcaatgaattgcagacattcatcaagaaagagataaaccct
aaagtattacacccttcattagacctggataaacttgatgagattccaaataaaactgga
atatacaggttttacaatgataaaaatgagctaatttatattggtaaaagtattcatatc
agaacccgtgttgaacaacatttaaagaactcaaaaacaaagaaagcactggagatgcga
gaagttatagctgatataagctatgaactcacaggaagcgagctcattgcattgttaaaa
gagtcagatgaaatcaagaaacaccaaccggtatataatcgagcgcaacgaacaaatctt
tttacccacggcttatatctgcacaaggatcaaagaggatatatgaatctcgttgttaag
aaaaatgtacctgccggacatcccattatgacttttaccagtattcaaaatggaaaaaag
tatttagaattttggcaggaagaatttcaactttgtcaacgattatgtggattgcacacg
ggagcatcagcttgttttaaatacaacataaaagaatgtaatggcgcatgtattggagaa
gaagatgttgaagaatacaataaaagagtagaatccttaatagacgacttaaattttaaa
ggcgattcttttttaataaccgataaaggtcgaaactctggagagtatggcttcgtattg
ataaaagatggacaatatgcgggctatggttttattccaagatatcaacttgcaagaaga
aaggagaatttcacaaagcacttaagaaaaaagaagagtaacagagattttcagtccatc
ataaaaatgcagttacacaaaaacagcaaattagacatacaccatttagactaa
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