Paracrocinitomix mangrovi: K6119_04965
Help
Entry
K6119_04965 CDS
T07876
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
crm
Paracrocinitomix mangrovi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_3
PAS_9
PAS
PAS_4
AAA_5
AAA_2
Mg_chelatase
PAS_8
AAA
HTH_8
AAA_19
MCM
Diguanyl_cycl_sensor
AAA_7
nSTAND3
AAA_16
Hydro_N_hd
T2SSE
AAA_30
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UKN02864
LinkDB
All DBs
Position
1103453..1105246
Genome browser
AA seq
597 aa
AA seq
DB search
MDQLISLALRNASNDAQIISDDHGKILSWNRGAKEIFGYSISNIVGESITTLMPKSFQKV
HIDALKDFRKTGRLLNAGSIYEMEGLTKSGKVFPVEISLNTFESEGVNYVCALVRDISKR
KALERKNKQNAVLLEHVQQISQLGVWCWNVIENKVQWSDLLYEIYGISKDNFKSSFEGYL
ERVHPEDREIAQNNIKRALDTKSQINFEERIIRPNGEIRYLRSWAGVQTNKKGEVVEMIG
ACLDITGRKLAENQLKKAFAEVNMLKRQLEEENVYLREEIQLQNNYENMVYGSENFKDVL
NQVEQVATTDATVLITGETGTGKELIARAIHNISNRNTKPLVKVNCAAIPKDLIESELFG
HTKGAFTGATQDKMGKFELADGGTLFLDELGELSLDLQPKLLRALQEGEIEKVGGQSVRT
VDVRVIAATNKNLKEEVQNGQFREDLYFRLNVFPINIPPLRERTSDIPFLLEHFVNKYAT
KHHKEINYISDDAMNFLKSYSWPGNVREFENTIERAIILSKDESLTFPDIKEDNHKKSKI
GESLANLDLVMKEHILKILNDVDWVIDGDNGAAEKLGLKPSTLRDRMKKLGIKRPKS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggatcaactaattagcctggctctcagaaatgcttccaatgatgctcagattatttct
gatgaccatgggaagatactttcatggaaccgtggtgctaaggaaatttttggttattcc
atttcaaatatcgttggagaatctatcaccaccttaatgcctaaatcttttcaaaaagta
catattgatgcacttaaggattttagaaagacaggacgactattaaatgccggtagtatt
tatgaaatggagggattaaccaaatcaggcaaagtttttcccgttgagatttcattaaat
acctttgagtcagaaggtgtaaattatgtatgtgctttggtaagagatatctctaaaaga
aaagcccttgaacgcaaaaacaaacagaacgcagtattgttagaacatgttcaacaaatt
tcacaactaggtgtctggtgctggaacgtgatagagaataaagttcagtggtcagattta
ttatatgaaatctatggtatttctaaagacaactttaaaagttcatttgaagggtattta
gagcgagttcatcccgaagatcgagaaatagctcaaaacaacattaaaagagctttagac
actaaatctcaaatcaattttgaagaaagaattatcagaccaaatggagaaataaggtat
ttaaggtcctgggccggtgttcaaaccaataaaaaaggagaagttgttgaaatgattggc
gcctgtttggatattaccggaaggaaacttgcagaaaatcaacttaaaaaagcctttgct
gaagtgaatatgcttaagcgtcagttagaggaggaaaacgtttatttaagagaagaaatt
cagcttcaaaacaactatgaaaacatggtttatggaagtgagaattttaaagatgtactt
aatcaggtggaacaagtagccaccacagatgctaccgtattaatcacaggtgaaacagga
acaggtaaagagttaatcgcaagggccattcataatattagtaatagaaacacaaaacca
cttgtaaaagtgaattgtgcagctatccctaaagatttaatagaaagtgaattgtttggt
catacaaaaggagcctttacaggagctactcaagataaaatggggaagtttgaattggct
gacggaggaactttgtttttagatgaattaggggaattatcactggatttgcaacctaaa
ttattgcgtgctcttcaagaaggtgaaattgaaaaagtaggtggacaaagtgtaagaact
gttgatgttagagtgatagcagccaccaataaaaatttgaaagaagaagttcaaaatggt
cagtttagagaagatctttatttcagattaaatgttttcccaattaacattcctccattg
agagaaagaacttcagatatacctttcttgctagaacactttgtaaacaaatacgcaact
aagcatcataaagaaatcaattacatttctgatgacgccatgaattttttaaaatcatat
tcctggccgggaaatgtcagagaatttgaaaacaccattgaaagagcaattatcttatct
aaagatgaaagtctaacttttccggatataaaagaagacaatcacaagaaatctaaaata
ggtgagagtcttgcaaacctggatcttgtaatgaaagaacacatcctaaaaatattgaat
gatgtggattgggtgattgatggagataatggtgctgctgaaaaattaggactcaagcca
agtaccttgagagacagaatgaaaaaactgggaattaaacgtccaaagtcctga
DBGET
integrated database retrieval system
