Paracrocinitomix mangrovi: K6119_05495
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Entry
K6119_05495 CDS
T07876
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
crm
Paracrocinitomix mangrovi
Brite
KEGG Orthology (KO) [BR:
crm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crm01002
]
K6119_05495
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
crm01011
]
K6119_05495
Peptidases and inhibitors [BR:
crm01002
]
Cysteine peptidases
Family C82
K6119_05495
Peptidoglycan biosynthesis and degradation proteins [BR:
crm01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
K6119_05495
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Replicase
Motif
Other DBs
NCBI-ProteinID:
UKN02968
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Position
1212269..1213936
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AA seq
555 aa
AA seq
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MKRYLHFILTLAVFVSLIGCSGNSRVLTEEEQAISDELKSKYKSADYLVFDGDTLMASSE
VLSFYQTNDFQPIWIVDNKLNDKGEVLYDLIKNARHHGFMPEMFNYSLIRETKNTSILDA
EMILSNGFLLYVSHMDAGCVDPTTGNYTWKKDSLDFDLIAELDKVREGSDPAEVILAHQP
ENWEYKQLQTGLVQFLDTYTLDTMTYDIPAFKEDSVKCYHAAHEALIGHGYLDASISDKD
SNFIHELKKFQKLNGLLDDGIVGKWTGRALNESNNERFYHAAISMEKWRWKKKPYPAKYI
RVNIPEFTLYFFDSTQLKSKHKVIVGAYDTQTPEFHASMERMITNPFWHVPYSIASTEIL
YGARKDSAYFSKRGYKVFKDGQQIDPTAVDWSGVGTNSFTYRVRQDGGAGNSLGKIKFLF
PNVHSVFIHDTPTKRLFENDVRAYSHGCIRLHRPFDLAKSILSSEVNAMEADTLDSLVYR
GTQRVIELKDPFEVYIEYFTVTGDSSGNVIFHPDIYGRDKKYIDNAYKKFYLPDDQTPDS
EEDQQVAEDSPIRKD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgctacttacactttatactgacccttgccgtttttgtttcattaattggatgt
tctggaaattcaagagtacttactgaagaagaacaagccatcagtgatgaattaaaatct
aaatataaatcagctgattatttggtatttgatggagatacattgatggcctcatctgag
gtgctttctttctatcaaacaaatgattttcaacctatttggattgttgacaataaactt
aatgacaaaggtgaagtactttatgatcttataaaaaatgcgcgtcatcatggattcatg
cctgaaatgttcaattactctttaatcagggaaacaaaaaacacttcgattttagacgct
gagatgattttatctaacggctttctattgtatgtatcacacatggatgcaggttgtgta
gatccaacaacaggtaattacacctggaaaaaagactccttagattttgatctcatagca
gaacttgacaaagtacgagaaggatcagatcctgctgaagtcattctggcgcatcaaccg
gaaaactgggaatataaacagttacaaacaggtttagtacagtttttagacacttacact
ttggatacaatgacttatgacattcctgcatttaaagaagattcagttaagtgttatcat
gcagctcatgaagctttaataggtcatggatatcttgatgcttctatcagtgataaggac
agtaattttatccatgaacttaaaaaattccaaaaattaaatgggttgttagatgacgga
atcgtaggtaaatggacaggaagagcattaaatgaaagtaacaatgaacgcttttatcac
gcagccatttctatggaaaaatggagatggaaaaagaaaccatatccagcgaagtacatt
cgtgtgaatatccctgaatttacactttacttttttgatagtactcaacttaaaagtaaa
cacaaagtaatagttggtgcatatgatacgcaaacaccagaattccatgcatctatggaa
agaatgatcaccaatccattctggcatgtgccttactctattgcttctacagagatttta
tacggagcaagaaaagattcagcatacttttcaaaaagaggatacaaggtatttaaagat
ggacaacagattgatcctactgctgtagactggtcaggtgttggtacaaatagctttact
tatagagtaaggcaggatggtggtgcaggaaatagtttggggaaaataaaattcttattc
ccaaatgttcactcagtatttatccatgatacgcctactaaaagattatttgaaaatgat
gtgcgtgcctactctcacggatgtattagacttcacagaccatttgatttagccaaatct
atattatcatctgaagttaacgccatggaagctgataccttagacagtcttgtttacaga
ggaacccaaagggttattgaactaaaagatccttttgaagtttatatagaatatttcact
gtaacaggagatagtagtggaaatgttatttttcatcccgatatttacggaagagataaa
aaatacattgacaacgcctataaaaaattctatctaccagatgatcaaacccccgatagc
gaagaagatcagcaagttgctgaagattcaccaatcagaaaggattga
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