Paracrocinitomix mangrovi: K6119_14175
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Entry
K6119_14175 CDS
T07876
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
crm
Paracrocinitomix mangrovi
Pathway
crm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K6119_14175 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crm03400
]
K6119_14175 (ruvB)
Enzymes [BR:
crm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6119_14175 (ruvB)
DNA repair and recombination proteins [BR:
crm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K6119_14175 (ruvB)
RecFOR pathway proteins
K6119_14175 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_22
AAA_3
AAA_16
nSTAND3
Mg_chelatase
Sigma54_activat
TsaE
Rad17
NB-ARC
Sigma54_activ_2
AAA_14
AAA_PrkA
NTPase_1
AAA_18
NPHP3_N
RNA_helicase
TniB
AAA_33
ABC_tran
NACHT
Bac_DnaA
AAA_17
AAA_28
AAA_24
Torsin
IstB_IS21
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UKN00878
LinkDB
All DBs
Position
3130140..3131165
Genome browser
AA seq
341 aa
AA seq
DB search
MESFDYRDEENFSGEEEFDQVLRPKKFGDFAGQSKVLENLEVFVQAAKQREESLDHVLLH
GPPGLGKTTLANIIANELGVGIKITSGPVLDKPGDLAGLLTNLEEGDVLFIDEIHRLTPV
IEEYLYSAMEDFTIDIMIDSGPSARTVQITLNPFTLIGATTRSGLLTSPLRARFGINSRL
EYYDTEVLSHIVERASGILGVSIDKDAAIEVARRSRGTPRIANALLRRVRDFAQIKGDGH
INLDIADMALEALNVDQNGLDEMDNKILSVIIEKFNGGPVGLTTIATAVGENAGTIEEVY
EPFLIKEGFIMRTPRGRKVTEKAFKHLGKDLGFFQGGLFNE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
ttggaatcatttgattatagagacgaagagaatttttcaggagaagaagagtttgatcag
gtattaaggcccaagaaatttggtgattttgctggtcaatctaaagtcctggagaatctt
gaagttttcgttcaggctgcaaagcaaagagaagaatcattagatcatgttttattacat
ggtcctcccggtttaggtaaaacaacgctggcaaatattattgctaacgaattaggtgtg
ggaatcaaaattacttctggccctgtactagataaaccgggtgatttagcaggtttgtta
actaaccttgaagagggtgatgtactttttatagatgaaattcataggttaactcccgta
attgaagagtatctttattcagctatggaggactttacaattgatatcatgatagattca
ggaccttctgccagaacagtacaaattactttaaatccattcaccttaattggtgcaaca
acacgttcgggcttactaacttctcccttaagagcaagatttggaattaatagtaggtta
gaatattacgatacagaagtattgtcacatattgttgaaagagcttcaggaatattaggc
gtaagtattgataaggatgctgctattgaagtagcaagaagaagcaggggaacacctaga
attgctaatgcattattgcgtagagttcgtgattttgcacaaattaaaggtgatggtcat
atcaatttggatatcgctgacatggctttagaagcattaaatgttgatcaaaatggcctt
gatgaaatggacaacaaaatcctatctgtcattattgagaaatttaacggaggtcccgtt
ggattaacaactatagcaacggctgttggtgagaatgcaggtactattgaagaagtttat
gaaccttttttaattaaagaaggatttataatgcgtacgcccaggggtagaaaggtcaca
gaaaaagctttcaaacatttaggaaaagacctgggattcttccagggaggattattcaat
gaataa
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