Paracrocinitomix mangrovi: K6119_18730
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Entry
K6119_18730 CDS
T07876
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
crm
Paracrocinitomix mangrovi
Pathway
crm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
crm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K6119_18730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crm03021
]
K6119_18730
Transcription machinery [BR:
crm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K6119_18730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
PADR1_N
DUF6285
HTH_10
Spore_GerAC
Motif
Other DBs
NCBI-ProteinID:
UKN01764
LinkDB
All DBs
Position
complement(4210228..4211097)
Genome browser
AA seq
289 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGRVDLITAEEEVELAKKIKQGDLKALDRLTKANLR
FVVSVSKQYQNQGLSLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QARIVRLPLNKIGIINKVNKAFAELEQELGRTPTIDELAEILEVSEQDVKYSISNSGRHV
SMDAPLKEGDEGSSSMYDVLQNPESNNPEKDLIAESLRSEIERSLSTLKMREADVIRLYF
GLGDQPPMTLAEIGLRFDLTRERVRQIKEKGIRKLKNTSRSKMLRAYLG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattaaaaattaccaaacaggtcactaacagggaaacagcatcactagacaaa
tatttacaggaaattggacgagttgacctcattacagctgaggaagaagtagaattggca
aaaaaaattaagcaaggcgatttaaaagcacttgacagactaacaaaggccaatcttaga
ttcgttgtttctgtatctaaacaataccaaaaccaaggattatcgcttcctgatttaatt
aatgaaggaaatttaggattaataaaagcagctcaaagatttgacgaaacaagagggttc
aaattcatttcatatgcagtatggtggattagacaatcgattcttcaagctttagctgaa
caggcaagaattgtaagacttccattaaataaaataggtatcatcaataaggttaataag
gcttttgctgaattagagcaagaacttggtagaactccaactattgatgaattagctgaa
attttagaagtttctgaacaagatgtaaaatactctatatcaaactcaggaagacatgta
tctatggatgctcctttaaaggagggtgatgaagggtcttctagcatgtatgacgtatta
caaaatcctgaaagcaataaccctgaaaaagatttgattgctgaatctcttagaagtgaa
attgaaagatcattaagcaccttaaaaatgagggaagcagatgtgatcagattatatttt
ggcttaggtgatcaaccaccaatgacattagctgaaataggactaagatttgatttgact
agagagagggttaggcaaattaaagaaaaaggaattagaaagcttaaaaacacttcaaga
agtaaaatgttgagagcttatttaggataa
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