Paracrocinitomix mangrovi: K6119_18820
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Entry
K6119_18820 CDS
T07876
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
crm
Paracrocinitomix mangrovi
Pathway
crm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6119_18820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crm03019
]
K6119_18820
03016 Transfer RNA biogenesis [BR:
crm03016
]
K6119_18820
Enzymes [BR:
crm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K6119_18820
Messenger RNA biogenesis [BR:
crm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K6119_18820
Transfer RNA biogenesis [BR:
crm03016
]
Prokaryotic type
tRNA degradation factors
K6119_18820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
DUF6449
S1_RRP5
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
UKN01780
LinkDB
All DBs
Position
complement(4231842..4233992)
Genome browser
AA seq
716 aa
AA seq
DB search
MNIITKSIDPGNGREMIVETGKLAKQADGSVVVKCGGTMILATVVSSQEAKDGVDFLPLT
VDYKEKFASAGKIPGGYLKREGRPSDDEVLIMRLVDRALRPLFPDDYHADTQVMMQMISW
DGVNMPDSMVGFAASAAIAVSDIPFNGPMSEVRVGRVDGKWVINPSYEEFEKSDVDVMIA
GTADNIVMLEGEMAEISEEEMVEVIKFAHDSIKKQCQFQLDFASGVEKAQTKREYNHETH
DDAIKQKIWSAVYDKCQAVARMGSEKDERAQAFREIYQEYVDSLDEETLEKESPFIQVYF
NKAKKEAVRRVMLDERLRLDGRKFDEIRQIWSEVDYLPSAHGSSVFTRGETQSLTTLTLG
GKLDEQMVDNATETRYDKFMLHYNFPPFSTGEARPIRGVSRREIGHGNLAFRALKGMLPT
GEDNPYTIRLVSEILESNGSSSMATVCAGCLALMDGGIQIKRPVSGIAMGLVTDDKGNYA
ILSDILGDEDHLGDMDFKVTGTTEGITACQMDIKIDGLNYDILTEALLQAKAGRAHILNE
MLKTIDAPRAEMKPNAPRIVSFLVPNDTIGAIIGPGGKIIQEIQKETGATITIEEISTGE
GSVQILADNAESMDAAIKRVKDIAFPPTVEEGEIYEGKVKSIQSYGCFVEILPGTDGLIH
ISELAWERLDKVDDICKEGDILKFKVIGRDPKTKKWKLSRKVLLPKPERKEAEKEG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaacataataactaaatcaattgatccgggaaacggaagagaaatgatcgttgaaacc
ggtaaattggcaaagcaagctgacggatctgttgtagtaaaatgtggtggaaccatgatt
ttagctacagtagtatcttctcaggaagctaaagacggagtagattttttaccattgacg
gtagactacaaagaaaaatttgcttcggcaggtaaaatccctggaggataccttaaaaga
gaaggtagaccttctgatgatgaagtactaatcatgcgtcttgtagaccgtgcattaaga
cctttgtttccggatgattaccatgcagacactcaagtaatgatgcaaatgatttcatgg
gacggtgtaaatatgcctgattctatggttggatttgcggcatctgctgctattgctgtt
tctgacattccgtttaacggacctatgtctgaagtaagagtaggacgtgttgatggaaaa
tgggtaattaacccatcttacgaagagtttgaaaaatcagatgttgatgtaatgattgcc
ggaacagctgacaacattgtaatgttagaaggtgaaatggcagaaatttctgaagaagaa
atggttgaagtgatcaaatttgctcatgattcaatcaaaaaacaatgtcaatttcaatta
gactttgcttcaggagttgaaaaagcacaaacaaaaagagaatataaccacgaaacacat
gatgatgctattaagcaaaaaatctggagcgcggtttacgataaatgtcaagcagttgct
cgcatggggtctgaaaaagacgaaagagcacaagcttttagagaaatctatcaagaatat
gttgacagcttagatgaagaaactttagaaaaagaatctccatttattcaagtttacttt
aacaaagcaaagaaagaagctgttagacgtgtaatgttagatgaaagacttcgtcttgac
ggaagaaaatttgatgaaatcagacaaatttggagtgaagtagattacttgccttcagct
catggttcatctgtttttacaagaggtgaaactcaatctttaactaccctaacattaggt
ggtaaattagatgagcaaatggttgataacgcaactgaaacaagatatgacaagtttatg
ttgcactacaacttccctcctttctcaactggtgaagctcgtcctatcagaggggtttca
agaagagaaattggacacggtaaccttgcgtttagagcgttaaaaggaatgctaccaaca
ggtgaagataatccttacactatcagattggtttctgaaattcttgaatcaaatggttcg
tcatcaatggctactgtttgtgcaggatgtttagctcttatggatggtggtatccaaatt
aaacgtccggtttcaggtattgctatgggattggtaactgatgacaaaggtaactatgct
atcctatcagatattcttggagatgaagatcacctaggtgatatggacttcaaagtaaca
ggaactactgagggtatcactgcttgtcaaatggatatcaaaattgatggtttgaactat
gatattttgactgaagccttattacaagctaaagctggtagagctcatatcttgaacgaa
atgttaaagacgattgatgctccaagagctgagatgaaaccaaatgcacctagaattgtt
agcttccttgtaccaaatgatactattggagctattatcggacctggtggtaaaattatt
caggagattcagaaagaaactggtgctacaattacaattgaagaaatttcaactggtgaa
ggtagcgttcaaatcttagctgataatgctgaatcaatggacgcagcaattaaaagagtt
aaagatatcgcattccctcctactgttgaagaaggagaaatttatgaaggaaaagttaaa
tctattcaatcatatggatgctttgttgaaattcttcctggaactgatggattgatccac
atttcagaattagcatgggaaagacttgataaagttgatgacatatgcaaagaaggagat
atcttgaaattcaaagtaattggaagagatcctaaaactaaaaaatggaaattatccaga
aaagttttacttccaaaaccagaaagaaaagaagctgaaaaagaaggttaa
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