Carnobacterium sp. 17-4: CAR_c00050
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Entry
CAR_c00050 CDS
T01452
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crn03032
]
CAR_c00050 (gyrB)
03400 DNA repair and recombination proteins [BR:
crn03400
]
CAR_c00050 (gyrB)
Enzymes [BR:
crn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CAR_c00050 (gyrB)
DNA replication proteins [BR:
crn03032
]
Prokaryotic type
DNA Topoisomerases
CAR_c00050 (gyrB)
DNA repair and recombination proteins [BR:
crn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CAR_c00050 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AEB28757
UniProt:
F4BL76
LinkDB
All DBs
Position
4397..6340
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AA seq
647 aa
AA seq
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MSVSEEIKSKQDRAKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSID
EALAGFADEINLIIEKDESITVIDNGRGIPVDIQAKTGRPALETVFTVLHAGGKFGGGGY
KVSGGLHGVGSSVVNALSITLDVYVHKDGKIYHQQYAQGKVVHDVEVIGETDKHGTTVHF
VPDPEIFKETVEFHFDKLATRVRELAFLNKGLKITVEDKREGKEKFLEYHYEGGIKSYVE
FLNENKTVLYDEPIFLEGEQQGITLEVAMQHTDGYHNNLLSFANNIHTYEGGTHEFGFKT
ALTRVINDYAKKNKIIKENEENLTGEDVREGLTIVLSIKHPDPQFEGQTKTKLGNSEART
ITDRLFSAHFDKFLMENPQVARQIVEKGLLAARARLAAKRAREVTRKKSGLEISNLPGKL
ADCSSKDPTISELFIVEGDSAGGSAKQGRSRLFQAILPIRGKILNVEKATLDRILANEEI
RSLFTAMGTGFGNDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVY
IAQPPLYQVRQGKKMVYLDSEEELDNYLKEIPLSPKPVIQRYKGLGEMDAEQLWETTMNP
ENRRMLQVTVDDAIEADKSCDMLMGDRVEPRRLFIEENARYVQNLDI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgtctgaagaaataaaaagcaaacaagatcgagcaaaagaatatgatgcgagt
caaatacaagttttagaaggtctggaagctgttcgtaaacgtccaggtatgtacattggt
tcaacgagtagtgaaggattgcatcaccttgtatgggaaattgtcgataattcaattgat
gaagccttagcaggttttgctgatgaaattaatctaatcattgaaaaagatgaaagtatt
accgttattgataatggtcgtgggattcctgttgatattcaagctaaaacaggtcgtcca
gcgttagaaactgtgttcacagttcttcatgctggaggtaaatttggcggtggaggttat
aaagtttcaggtggcttacatggagttggttcctcagtggttaacgcactttcgatcact
ttagatgtttacgtacacaaagacggaaaaatctatcatcaacaatatgctcaaggaaaa
gttgttcatgatgtagaagtcattggtgaaacagataaacatggaacaactgtccacttc
gttccagatcctgagatttttaaagaaactgtagaatttcactttgataaattagctaca
cgtgtccgagaattagcgttcttaaacaaaggattaaaaattacggttgaagacaagcgt
gaaggtaaagaaaaatttctagaataccactacgaaggcggtattaagagctatgtagag
ttcttgaatgaaaataagactgttttatatgatgagcctatttttctagaaggcgaacaa
caaggcatcactcttgaggtagctatgcaacatacagacggttatcacaacaatttatta
agttttgctaacaacattcatacttatgaaggtggaacgcatgaatttgggttcaagaca
gccttaacacgtgtgataaatgattacgcaaaaaagaacaaaataattaaagaaaatgaa
gagaatctaacaggtgaagatgtacgtgaaggcttaacgatcgtcttatccattaaacac
cctgatcctcagtttgagggacaaacgaaaacaaaattaggaaactctgaagcccgtacc
attacagaccgactattctctgcgcattttgataaattcttgatggaaaacccacaagta
gctcgtcaaatcgttgaaaaaggattgttagcagctagagctcgtttagctgccaaaaga
gctcgtgaagtaacgcgtaaaaagagtggattagaaatcagtaatcttcctggtaagtta
gcagattgttcgagtaaagatccgactatcagcgaattattcattgttgagggagattct
gccggcggttctgctaagcaaggacgttcgagactctttcaagcgatcttaccaattcgt
ggaaaaatcttaaacgtagaaaaagcaacactggatagaattttagcgaatgaagaaatc
cgttcgttgtttacagcaatgggaacaggatttggaaatgactttgatgtttctaaagcg
cgttaccataaattagttattatgacagatgccgatgtcgatggagcacatattcgtaca
ttattattgactttattctatcgttacatgcgtccagtagttgaagcgggatatgtttac
atcgctcagccgcctttataccaagtacgccaaggtaaaaaaatggtctatttggattca
gaagaagagctggataattatttgaaagaaatacctctttcaccaaaacctgtcattcaa
cgatacaaaggtcttggagaaatggatgctgaacaattatgggaaacaaccatgaatcca
gaaaacagacggatgttgcaagtcacagttgatgatgctattgaagcagataaaagttgt
gatatgttaatgggtgaccgtgttgaaccaagacgtctattcattgaagaaaatgcacgt
tacgtacaaaatttagatatttaa
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