Carnobacterium sp. 17-4: CAR_c00550
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Entry
CAR_c00550 CDS
T01452
Symbol
yvqJ
Name
(GenBank) putative efflux protein
KO
K08217
MFS transporter, DHA3 family, macrolide efflux protein
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crn02000
]
CAR_c00550 (yvqJ)
01504 Antimicrobial resistance genes [BR:
crn01504
]
CAR_c00550 (yvqJ)
Transporters [BR:
crn02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-3 (12 spanner) (DHA3) [TC:
2.A.1.21
]
CAR_c00550 (yvqJ)
Antimicrobial resistance genes [BR:
crn01504
]
Gene variants
Macrolide resistance genes
Transporters
CAR_c00550 (yvqJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_3
Sugar_tr
Motif
Other DBs
NCBI-ProteinID:
AEB28806
UniProt:
F4BKW3
LinkDB
All DBs
Position
61542..62786
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AA seq
414 aa
AA seq
DB search
MNQQGKRLKEHWQRTTALFLISQTISLFGSLLVQYAITWYLTLKEQSGVVMMLAVIFGFL
PTFFLSPFAGVWADRYNRKKLIILSDAVIALSTLLLIFLFLSGYGSVGVLLFASAIRALG
AGIQTPAVSAVLPQIVPEEELTKVNGINGSIQAGTMLISPMASGALLNFASMEVIFSIDV
LTAILAIVMLLFFLDIPTHKKAEQIQVNSYFTDLKLGFSYIDNQVYLKKLFRYFSLAYLL
AAPVSFLTPLQVTRTFGEDVWRLTTIEVAFSIGMILGGFLIAFWGGFKNRMHSITFSILV
MGVCTVLLGVIPNFLIYSLLMAVFGIVMPLLNAPTIVILQEKVPEDYLGRVFGVQTMIAT
AMMPLGMLVFGPLADLFRIEWLLVISGVLLFILTLFMFKDEQLLKAGIPKEEHD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcagcaggggaaaagactaaaggaacattggcaacgaacaactgctctatttcta
atcagtcagacgatttcattgtttggctctttattagtccaatatgccattacttggtac
cttacattgaaagaacaatccggcgtagtcatgatgctggcagttatttttggttttttg
ccgactttcttcctgtctccatttgcaggtgtatgggcggaccgctataatcgaaaaaag
ctcatcatcctttctgatgcagtgattgccctctcaaccttactcttgatttttcttttt
ctaagcggttatggttctgtaggagttttactgtttgcttcagctattcgagctttaggc
gcgggaatacagactccagcggttagcgcagtattgcctcaaattgtaccagaagaggaa
ctcactaaagtaaatggtattaatggaagcatccaggcaggtacaatgttgatttcacca
atggcgagtggagcattattaaatttcgcttcaatggaagttattttttcaatcgatgtt
cttactgcaatactggctatagtcatgttgctttttttcttagatattcctacacataaa
aaagcggaacaaattcaagtgaattcttattttacagaccttaaattagggttttcttat
attgacaatcaagtatatttgaaaaaattatttcgttacttctcactggcttatttatta
gctgctccagtttcttttttaacaccattgcaagtgacacgaacctttggggaagacgta
tggaggttgactacaattgaggtagctttttcaatagggatgatactaggaggctttttg
atagccttttggggaggttttaagaatcgaatgcactcgatcactttttctatcttagtg
atgggtgtatgcacggttcttttaggagtgattcctaattttttgatatattcacttctt
atggctgtctttggtatcgttatgccactgttaaatgcaccaacaatcgtgatattacaa
gaaaaggtaccagaggattatttaggaagagtatttggtgtgcaaaccatgatagctaca
gcaatgatgccattgggaatgttagtgtttgggccacttgcagatcttttccgaattgaa
tggcttctagtgatctctggtgtactgttgtttatcctgacgttatttatgtttaaagat
gaacagcttttgaaagccggcataccaaaagaagagcatgattag
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