Carnobacterium sp. 17-4: CAR_c01750
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Entry
CAR_c01750 CDS
T01452
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CAR_c01750 (rnmV)
Enzymes [BR:
crn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
CAR_c01750 (rnmV)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
PfkB
MTABC_N
Motif
Other DBs
NCBI-ProteinID:
AEB28926
UniProt:
F4BLG4
LinkDB
All DBs
Position
175502..176068
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AA seq
188 aa
AA seq
DB search
MEKIKEVIVVEGRDDTRRVLESVEADTIETNGSAIDEETLKLIGKAHETRGVIVFTDPDF
PGEKIRKIISQAIPGVKHAFLTKDEARAKGKGSLGIEHASPEAIRAALSKCYTETIAKES
LISQELLMDAGLIMGPFARKRRTKLGEKLSIGYTNGKQLQKRLQMFQISPEEVVTVMQQI
LEEENDNT
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaataaaagaagttattgttgttgaaggccgtgatgatacaaggcgtgttttg
gaatcggttgaagcagacactattgaaacaaatggttcagctattgacgaagaaacgttg
aaattgataggaaaagctcacgaaacaagaggcgtcattgtctttacagatccggatttt
ccgggtgaaaaaatccggaaaatcatttcacaagccataccaggagtgaaacacgctttt
ttgacaaaagatgaggctagagcaaagggcaaaggcagcttgggtattgaacatgcttca
cctgaagctatacgcgcagcactatcaaaatgctacaccgaaaccatagctaaagagtcg
ctcatctcacaagaattattaatggatgctggcttgattatggggccttttgctcgaaag
agacgaaccaaattgggcgaaaaacttagtattggttacactaacggaaaacaacttcaa
aagagattgcaaatgtttcaaatctcacctgaagaagttgtaacagtgatgcaacaaatt
ttggaggaagaaaatgacaacacataa
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