Carnobacterium sp. 17-4: CAR_c02940
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Entry
CAR_c02940 CDS
T01452
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase, subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAR_c02940 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crn03021
]
CAR_c02940 (rpoE)
03400 DNA repair and recombination proteins [BR:
crn03400
]
CAR_c02940 (rpoE)
Transcription machinery [BR:
crn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAR_c02940 (rpoE)
DNA repair and recombination proteins [BR:
crn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAR_c02940 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
BUD22
Motif
Other DBs
NCBI-ProteinID:
AEB29029
LinkDB
All DBs
Position
298739..299356
Genome browser
AA seq
205 aa
AA seq
DB search
MKLTQFDGQNKNELSMIEVAHAILDQKGEILDFSALLKEVQEFLNINSKEIANATSQFYT
DLNIDGSFISLGENRWGLRSWYPIDFIDEEVTQGNEDEAPRRKKRKKASAFVTGEDDIDY
NDDDPEDDDSPEEEEEDDATTYGGRVTVDEHGVMIDDEDKEDLGEYKADLTELGTDDEED
ELPDGVEGDLTIIEDEDEDDSEEEY
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattaacacaatttgacgggcaaaacaaaaatgaattgtcaatgattgaagtagct
catgccatcttagatcaaaaaggagagatccttgatttctcagctttactaaaagaagta
caagaatttttaaacataaactcaaaagaaattgctaatgcaacttctcaattttataca
gacttaaatattgacggtagtttcatttctttaggagaaaatcgttggggactacgttca
tggtatccaatcgattttatcgatgaagaagtaactcaaggaaatgaagacgaagcacca
cgtcgtaaaaaacgtaaaaaggctagtgcatttgttacaggggaagatgacattgattac
aatgatgatgatcctgaagatgatgattctcctgaagaggaagaagaagatgatgctact
acttacggtgggcgtgtgactgttgatgaacacggtgtaatgattgacgatgaagacaaa
gaagatcttggtgaatacaaggcagatctaactgaattaggtactgatgatgaagaagac
gagttgcctgacggtgtcgaaggagatcttacaattattgaagacgaagacgaagacgat
tctgaggaagaatattaa
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