Carnobacterium sp. 17-4: CAR_c03440
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Entry
CAR_c03440 CDS
T01452
Symbol
ydcI
Name
(GenBank) putative RNA helicase
KO
K06959
protein Tex
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CAR_c03440 (ydcI)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
Transposase_20
ATP-synt_ab_C
Cortex-I_coil
HTH_Tnp_ISL3
PKS_DE
Motif
Other DBs
NCBI-ProteinID:
AEB29065
LinkDB
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Position
346210..348387
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AA seq
725 aa
AA seq
DB search
MMETNESIVIDLLKNELKSYSKKQITTVLDLLAEGNTVPFIARYRKEMTDTLDEVQIREI
EERHQYLTNLEKRKNDVLRSIGEQEKLTPELEGKIKKATKMQLVEDLYRPFKQKRRTKAT
IAKESGLEPLAQWLLSFPTTDVQVEAEKYVNEEHKIATGEEALAGAHEIIAERIGDEPTY
RTWIREYSSKNGAIKAKVKNADKDEKGTFEMYYDYSEPLTKVASHRILAMNRGEKEDILK
VSFDLNEQKIHEYLEKQLIEQSNSTAVPFIKAAFEDSYKRFIGPSIEREIRAELTEKAGE
QAIHIFGENLRNLLLQAPLKGKIVLGLDPAYRTGCKLAVIDPTGKVLAIDVIYPHKPAGA
AARAEAAVKFKKLIDSYQVEMIAIGNGTASRESETFVSENLKEMERQVFYVIVNEAGASV
YSASKTAREEFPDLQVEQRSAVSIARRLQDPLAELVKIDPKSVGVGQYQHDVSQKRLEER
LDFVVETAVNQVGVNVNTASTPLLQHVAGLNKTTATNVVAYREDNGRFESRAQLKKVARL
GPKAYEQAVGFLRIIDGKNVLDNTGIHPETYKEAKQILELAGLTLSDVGSLEAKKVLEKM
DVAALAEQVGLGKETVKDMLQALSKPGRDLRDEMSAPLLRTDVLSMEDLIPGMELEGTVR
NVVDFGAFVDVGVKQDGMVHISKLSKGYIQHPTNVVSVGDVVTVWVDSVDLKKGRIALTM
LKPKE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaacaaacgaatcaattgtaatagatttattaaaaaatgaattaaaaagctac
tctaaaaagcagataacaacagtcttagatctattggctgaagggaatacagtcccattt
atagctcgataccggaaagaaatgaccgatacgctggatgaagtccaaatacgcgaaata
gaagaacgtcatcaatacttaacaaatttagaaaagcgtaaaaatgacgttttaagaagt
attggagaacaagaaaaattaacaccagaacttgaaggtaaaattaaaaaagcgacaaaa
atgcagttagtggaagatttgtatcgtccattcaaacaaaaacgacgtacaaaagccacg
atagctaaagaaagtggcttagaacctctagcacaatggttgttgtcatttccaacgacc
gatgtacaagtggaagctgaaaaatacgtcaatgaagaacacaaaattgctacaggtgaa
gaggcattagctggagcacacgaaattattgctgaacgaattggggatgaaccaacttac
agaacttggattcgggaatacagttctaaaaatggggcaatcaaagctaaagttaaaaat
gctgataaagatgaaaaaggaacttttgaaatgtactatgactacagcgaaccgttgaca
aaagttgcatctcatcgtattttagcgatgaatcgcggagaaaaagaagatatcttaaaa
gtttcttttgatttgaacgaacaaaaaattcatgagtatttggaaaaacaattaattgag
cagtctaattccactgcggttccttttataaaagcagcttttgaagatagttataaacgg
ttcatcggaccatctattgaacgtgagatccgtgcagaattaacagaaaaagctggagaa
caagccattcatatttttggagaaaatctacgtaatttattactacaagccccactaaag
ggtaagattgttttaggattagatccggcttaccgtacaggttgtaaactcgcggttatt
gatccgacagggaaggtgcttgcgattgatgtgatttatccacacaaaccagcaggtgca
gctgcacgtgctgaagccgcagttaaattcaaaaaattgattgactcgtatcaagttgaa
atgatcgcaattggaaacggaacagctagccgtgaatctgaaacctttgtttcggaaaac
ttaaaagaaatggaacgacaagttttctacgtgattgtaaatgaagcgggtgcatctgtt
tactcagcaagtaagacagctcgtgaagagttccctgatctgcaagttgagcaaagaagt
gcggttagcattgcccgcagattgcaagatcctttagctgaacttgtaaaaattgaccct
aaatcagttggtgttggtcaataccaacatgatgtttctcaaaaacgcttggaagaacgc
ttggattttgttgtagaaacggcagttaaccaagtgggtgtaaatgtaaacactgcaagt
acacctttattgcaacacgttgctggattaaataaaacaacagctaccaatgttgtggct
taccgtgaagacaatggtcgctttgaaagtcgtgctcaattgaaaaaagttgctcgctta
ggccctaaagcttatgaacaagctgtaggattcttacgcatcattgacggaaaaaatgtc
ttagacaatacaggtattcatccagaaacctataaagaggcaaaacaaattttagaatta
gctggattaactttatcagatgttgggagtctagaagccaagaaagttttggagaaaatg
gacgtagcagcattggctgagcaagttggtttaggtaaagaaactgtaaaagatatgcta
caggcattgtcaaaacctggccgtgacttaagagatgaaatgtcagctccgttattgcgt
acagatgttttaagcatggaagatttaataccgggtatggaattagaaggaacggttaga
aatgtggttgattttggagcatttgtagatgtcggagtcaaacaagatggaatggttcat
atttctaaattaagcaaaggctacattcaacatccaacaaatgttgtttctgtaggcgat
gttgtgacggtttgggttgatagtgtggatctgaaaaaaggtcgaatcgccttaacaatg
ttgaaaccaaaagaataa
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