Carnobacterium sp. 17-4: CAR_c03920
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Entry
CAR_c03920 CDS
T01452
Symbol
yvcJ
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crn03019
]
CAR_c03920 (yvcJ)
Messenger RNA biogenesis [BR:
crn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CAR_c03920 (yvcJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_22
SKI
DUF5447
AAA_16
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEB29113
UniProt:
F4BLR9
LinkDB
All DBs
Position
401252..402139
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AA seq
295 aa
AA seq
DB search
MVDSLQLVILTGMSGAGKTVAMQSFEDMGYFCVDNMPPSLLPKFWELVKESGKLTKIALV
IDLRSRAFFEEIVTALESMDNTSFVTTKIVYLDASDEELVSRYKETRRTHPLAMNGRLIV
GIKKERELLEDIKGRAQIVIDTTKLTPRQLREKINSNFKTVDTELFRIEMVSFGFKYGLP
IDADVVMDVRFLPNPHYIDSLRPLTGQDKPVYDYVMKQPETEIFYRKFTDLLEYILPGYK
KEGKNNVTIAIGCTGGKHRSVALVERIAQKIEIDGYPVHVTHRDKGKVKESVNRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggtagatagtctacaattagtcattcttactggaatgagtggagcaggtaaaacagtg
gcaatgcagagttttgaggatatgggttatttttgtgtggacaatatgccgccaagctta
ctgccgaaattttgggaattagttaaagaatctggtaaattaacaaaaattgctttagtg
attgatttacgttcgagagccttctttgaagaaatcgtaacagctttggaatctatggat
aatacctcttttgtgaccacaaaaatagtctatttagatgcaagtgatgaagaattggtt
tctcgttataaagaaacacgacgcacacatcctttagcaatgaatggacgtcttattgta
ggaataaaaaaagaaagagaattattagaagacataaaagggcgagcacaaattgtgatt
gatacaacgaaattgacgccacgacaattaagagaaaaaatcaatagtaattttaaaact
gttgatactgagttatttagaattgaaatggtatcatttggattcaaatatggcttacca
attgatgcagatgtagtgatggatgtccgctttttacctaatcctcattatattgatagt
ttaagaccattaacaggtcaagataaacctgtttatgactatgtaatgaaacaaccagaa
acagaaatattttatcgtaaatttacagatttattagagtatattttgccgggatacaaa
aaagaaggtaaaaacaatgttactatcgcaattggctgtacgggtggaaaacaccgttca
gtagccttagttgaacggattgctcagaaaattgaaatcgatgggtaccctgtccatgta
actcatcgcgataaaggaaaggttaaagaatcggtgaatcgttcatga
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