Carnobacterium sp. 17-4: CAR_c04540
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Entry
CAR_c04540 CDS
T01452
Symbol
yfiB
Name
(GenBank) uncharacterized ABC transporter ATP-binding protein YfiB
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CAR_c04540 (yfiB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crn02000
]
CAR_c04540 (yfiB)
Transporters [BR:
crn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CAR_c04540 (yfiB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
nSTAND3
AAA_29
DUF87
AAA_22
AAA_18
NB-ARC
AAA_23
Zeta_toxin
Rad17
AAA_16
YtxH
Motif
Other DBs
NCBI-ProteinID:
AEB29174
UniProt:
F4BM60
LinkDB
All DBs
Position
complement(470552..472309)
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AA seq
585 aa
AA seq
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MNNMHLFFTFLKKNKLLVLATSSLILLQSVATLFIPYLIAQLIDKGILEKNTSVVSSIGV
QMLLTILIGAVVGVLGSYYTSEIASRFGKETRKKLFRKIQDLSLNDTNKIGVASLVTRTS
SDVVNIQEVTLSLFQMVLPSPFMAVISIVLAYRISPIMMVIPLVSILIFIGVITAVMFKS
TRLINNIQKKMDKMTMLVRQFFKGVKIIRAFDNAEYEKNKVDGSFNDFAANMIRINKYFA
FLTPVAFSLNALTMIPIIWVGSSLVAENSIQVGSITAVIGYSVITMSSFIMTALIMFNIP
RAIASLNRLQEVLTLQPEVEDEIQLNEKVDVTVQPALSFENVTFKYQGADKSVLEDMDFS
INTGEVLAIVGGTGSGKSTIAKILLRFNDIQKGRILIHGTDISKLSQKDLRSLISYVPQR
AFLFSGTIQDNILDGNKEATIDELRHAAQVAQSLPFIEEQDQQFNALVAQGGTNFSGGQK
QRLAIARALIKKSQIYVFDDSFSALDYKTDAKLRAALKPELKDAVTLIIAQRISTIIDAD
QIIVLNEGKIVGKGTHSELIEKNPVYQELARSQNMQSKSEVTENV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatatgcatttattttttacatttttaaagaaaaacaaactgcttgtcctcgct
acaagtagcttaattttacttcaatcagtagcaactctattcattccttatttaatcgct
caactcattgataaaggcattttagaaaaaaataccagcgtcgtttcttctattggagtc
cagatgttgcttactatacttataggtgccgttgttggagtgcttggaagttactatact
tctgaaattgcttcacgttttggaaaagaaacacgtaaaaaactatttagaaaaatacaa
gatttgtcactaaatgacactaataaaattggtgtggcctctttagtcacgagaacgtct
agtgatgttgtcaatattcaagaagtcactttgtctctctttcaaatggttttaccaagt
ccatttatggcagtcatttctatagtattggcttatcggatttcccctattatgatggtc
attccacttgtatccattcttatttttatcggtgtgattactgccgtgatgttcaaatct
actcgcttgattaataacatccagaaaaagatggataaaatgacgatgcttgttagacaa
ttttttaaaggcgtaaaaattattcgtgcgtttgataatgcagaatatgaaaagaataaa
gttgatggtagttttaatgattttgctgctaacatgattcggatcaataagtactttgcc
tttctaacacctgttgcttttagcctgaacgcccttacgatgatccctattatttgggtg
ggcagttcattagttgcagaaaacagcattcaagtaggttccattactgccgttataggg
tactcagtcatcacaatgtcttcatttatcatgaccgctttgatcatgtttaatatacca
agagcaatcgcatcattaaatagacttcaagaagtactgacgcttcagccagaagtggaa
gatgaaattcagttaaacgaaaaagtagatgttactgtgcagcctgctttgtcatttgaa
aatgtaacgtttaagtaccaaggtgctgacaaatcagtcttagaagacatggatttttcc
atcaatacaggtgaagtattggctatcgttggtggaacgggctccggtaaaagtacgatt
gctaaaatccttttacggttcaatgacattcaaaagggtcgcattttgatacacggtaca
gatatcagcaaactttctcaaaaagaccttcgttcattgatcagctacgtcccacaacga
gcatttctatttagtggaaccatccaggataatattttagatggaaataaagaagctacg
attgacgaattgagacatgctgctcaggttgctcaatccttaccgtttatagaagaacag
gatcagcaatttaatgccttggtagctcaaggaggaaccaatttttctggcggacaaaaa
caacgtttggcaatcgcacgtgcattgataaagaaatctcagatttatgtatttgacgat
agtttttcggcactggattataaaacagatgcgaaactaagagccgctttaaaaccagaa
ttgaaagatgcggtaacgttgatcattgcccaaagaatcagcacgatcattgatgccgat
caaatcatcgtcttaaatgaaggtaaaattgtgggtaaaggaacccattcagaattaatt
gaaaaaaatcctgtctatcaagaattagctagatctcaaaatatgcagtctaaaagtgag
gtgacagaaaatgtctaa
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