Carnobacterium sp. 17-4: CAR_c05630
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Entry
CAR_c05630 CDS
T01452
Symbol
lytF
Name
(GenBank) gamma-D-glutamate-meso-diaminopimelate muropeptidase
KO
K19220
peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-]
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crn01002
]
CAR_c05630 (lytF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
crn01011
]
CAR_c05630 (lytF)
Peptidases and inhibitors [BR:
crn01002
]
Cysteine peptidases
Family C40
CAR_c05630 (lytF)
Peptidoglycan biosynthesis and degradation proteins [BR:
crn01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
CAR_c05630 (lytF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Glucosaminidase
OapA
Motif
Other DBs
NCBI-ProteinID:
AEB29260
UniProt:
F4BMM5
LinkDB
All DBs
Position
562673..566440
Genome browser
AA seq
1255 aa
AA seq
DB search
MEKTRKERISAVKNQTNFVQSENANGLIKKGTAVFSTTLLVSLLAFPTFSASASANELAE
TSSQKLEETIEQNNTATEEGQKVAIEAANSEYIPEEDATEKQQLIDELKLVLSTEHFDSL
KFEELSIEEIDELFTVALETSELNKETETPADIETIDVVIEETETTDDVIPKSDITEKLD
ESKADVPEKESVKEAEDTATVVTEETEVEESLETEKGVPTEKLIVEENNNVTTEPIESVV
VEVPSIPENKVVEPVVEPVVEPVVEPVTEPVKEEVKEEVIVEEAKVVTPKVATTSAKIAA
TTSAKKVATTVTTAAVEKAKTYTVKSGDTLNKISKANNVSVAQLKKWNKLSTDLIKIGQV
LALNETASKSTPTATPTNTNNAIVDASTPAGFVNGITSYAKQVAANNNLYASVMIAQAAL
ESGYGTSKLSTNPNYNLFGIKGSYNGNTVTMYTSEWSSSTGWIYIPQNFKKYPSYAESLQ
DNANLLKRGTSWDNGYYSGAWASNSNNAYEATAWLQGRYATDPSYASKLNAIIKTYNLTQ
YDTKSSGETAPTTPNIPVSNDNNVSTPDTGNTSSTSYKVKSGDTLTAIASKYGVSVSNLK
SWNNLKSDTIYVNQTLTIKGGSTTGGTITPTPNPSTGNTSNTSYKVKSGDTLTRISSQYG
VSVSNLKSWNNLKSDTIYVNQTLTIKGGSTTGGTTTPTPNPSTGNTSNTSYKVKSGDTLT
RISSQYGVSVSNLKSWNNLKSDTIYVNQTLTIKGGSTTGGTTTPTPNPSTGNTSNTSYKV
KSGDTLTRISSQYGVSVSNLKSWNNLKSDTIYVNQTLTIKSGSTTPAPSPSTGNTSNTSY
TVKSGDTLTGISSKHGVTVSNLKSWNNLKTDTIYVNQALTIKGGNTTTTPAPSTGNTSNT
SYTVKSGDTLTGISSKHGVTVANLKSWNNLKTDAIYVNQALTIKGGTTTPTPAPSTGNTS
NTSYTVKSGDTLTGISSKHGVTVANLKSWNNLKTDAIYVNQALTIKGGTTTPTPAPSTGN
TSNTSYTVKSGDTLTGISSKHGVTVANLKSWNNLKTDAIYVNQALTIKGGNTTATPAPSP
STGNTSNTSYTVKSGDTLTGISSKHGVTVANLKSWNNLKTDAIYVNQALTIKGGTTTPTP
APSTGNTSNTSYTVKSGDTLTAISSKYGVSISNLKSWNNLSTDAISIGQTLVVNKGAASN
SAVITKPTTSGTHKVVSGDTLWDIAQKYGMSISDLKTANYLKSDVIFVGQSLIIK
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaacaaggaaagaaagaatttcagctgtaaagaatcaaacaaactttgttcaa
tcagagaacgctaatggattgatcaaaaaaggcacagctgttttcagtacgacgttatta
gtgagtttactagcattcccaacattctctgcatcagctagtgcaaatgaattagctgag
accagtagtcaaaaactggaagaaacaattgaacagaataatactgcaactgaagaaggc
caaaaagtagccatagaagcagccaatagcgaatacataccagaagaagatgccactgaa
aaacaacaacttattgatgaacttaaattagttctgtcaactgaacattttgattcttta
aaatttgaagaattatcaatcgaagaaattgatgaattatttacagttgctttagaaacg
tcagagttaaataaagaaacagaaactcccgctgatattgaaacaattgatgttgttatt
gaagaaactgaaacgacagatgatgttataccaaaatcagacatcacagaaaagttagat
gaatctaaagctgatgtacctgaaaaagaatcagtaaaagaagctgaggatactgctaca
gtagttacagaagaaacagaagtagaagaatcattggaaaccgaaaagggtgttccaaca
gaaaaattaatagtagaagaaaataataatgttactactgaaccaattgaatcagtagtt
gtagaagtaccaagtattccagagaacaaagtagtagaaccagtagtagaaccagtagta
gaaccagtagtagaaccagtaacagaaccagttaaagaagaagttaaagaagaagttatc
gtagaagaagctaaagtagtaactcctaaagtagcaactacttcagctaaaatagcagct
acgacttcggctaaaaaagtagcaacaacagtaacaacagctgctgtggaaaaggctaaa
acatatactgttaagtctggtgatacactaaataaaattagtaaagctaataatgtttct
gtagcacaattgaaaaaatggaataaattatcaacagatcttattaaaataggacaagtc
ttagctttaaatgaaactgcgtcaaaaagtacaccaacagcaacgccaactaatactaat
aatgcaattgtagatgcatcaacacctgctggatttgttaatggcattacatcatatgca
aaacaagtagctgcaaataacaatttgtatgcttcagttatgattgctcaagcagcatta
gagagcggttatggtactagtaaattatcaactaatccaaactataatttatttggtata
aaaggaagttacaatgggaataccgttacaatgtatacatctgaatggagttcttcaaca
ggttggatttacatcccgcaaaactttaagaaatacccatcatatgctgaatcattgcaa
gataacgctaatctcttaaaaagaggaacttcttgggataatggctattactcaggtgca
tgggccagtaattcaaataatgcatatgaagcaactgcatggttacaaggacgatacgca
acggatcctagctatgcttctaagttaaatgctattataaaaacttataacttaacgcag
tatgacacgaaatcttctggagaaacagcaccaacaacgccgaatattccggtatcaaat
gataataatgtttcaacaccagatacgggtaatacgagcagtacatcttacaaagtgaaa
tcaggcgatacattgacagctattgcatcaaaatatggcgtatctgtttcgaacttgaaa
tcatggaataatttaaaatcagatacgatatatgtgaaccaaacattgacgatcaaaggt
ggatcaacaacaggtgggacaataactcctacgccaaatccaagtacaggaaatacaagc
aacacgtcttataaagtaaaatcaggtgatacgttgactcgaatttcatctcaatacggt
gtatctgtttcgaacttgaaatcatggaataatttaaaatcagatacgatatatgtgaac
caaacattgacgatcaaaggtggatcaacaacaggtgggacaacaacacctacgccaaat
ccaagtacaggaaatacaagcaacacgtcttataaagtaaagtcaggcgacacgttgact
cgaatttcatctcaatacggtgtatctgtttcgaacttaaaatcgtggaataatttaaaa
tcagatacgatatatgtgaaccaaacattgacgatcaaaggtggatcaacaacaggtggg
acaacaacacctacgccaaatccaagtacaggaaatacaagcaacacgtcttataaagta
aaatcaggcgacacgttgactcgaatttcatctcaatacggtgtatctgtttcgaactta
aaatcgtggaataacttaaaatcagatacgatatatgtgaaccaaacattgacgattaaa
agtggatcaacaactccagcaccaagtcctagtactggaaatacaagcaatacgtcatac
actgtaaaatcaggtgacacgttgactgggatcagttcaaaacacggtgtaactgtttca
aatttgaaatcgtggaataatctaaaaacagatacgatttacgtgaaccaagcgttgacg
attaaaggtggtaacacaacgacaacaccagcaccaagtactggaaatacaagcaatacg
tcatacactgtaaaatcaggtgatacgttgactggaatcagttcaaaacacggtgtaact
gttgcgaacttgaaatcatggaacaacttaaaaacagatgcgatatatgtgaatcaagcc
ttaacgatcaaaggtggtacaacaacgccaacaccggcgccaagtactggaaatacaagc
aatacgtcatacactgtaaaatcaggtgatacgttgactggaatcagttcaaaacacggt
gtaactgttgcaaacttgaaatcatggaacaacttaaaaacagatgcgatatatgtgaat
caagccttaacgatcaaaggtggtacaacaacgccaacaccggcgccaagtactggaaat
acaagcaatacgtcatacactgtaaaatcaggtgatacgttgactggaatcagttcaaaa
cacggtgtaactgttgcaaacttgaaatcatggaacaacttaaaaacagatgcgatatat
gtgaatcaagccttaacgattaaaggtggtaacacaacggcaacaccagcaccaagtcca
agtaccgggaatacaagcaacacgtcatacactgtaaaatcaggtgatacgttgactgga
atcagttcaaaacacggtgtaactgttgcgaacttgaaatcatggaacaacttaaaaaca
gatgcgatatatgtgaatcaagccttaacgatcaaaggtggtacaacaacgccaacaccg
gcgccaagtactggaaatacaagcaatacgtcatacactgtaaaatcaggtgatacgttg
actgcaattagttcaaaatatggagtatctatttcaaacttgaaatcatggaacaaccta
tcaacggatgcaatcagtattggtcaaacattggtagtaaataaaggtgcagcttctaat
tctgcagtaataactaaaccaactacatctggaactcataaagttgtaagtggcgacact
ctatgggatattgctcaaaaatacggcatgtctatttcagacttaaaaacagcaaactat
ttaaaatcagatgttatatttgttggtcaatctttgattatcaaataa
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