Carnobacterium sp. 17-4: CAR_c06880
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Entry
CAR_c06880 CDS
T01452
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CAR_c06880 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crn03400
]
CAR_c06880 (mutS)
DNA repair and recombination proteins [BR:
crn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CAR_c06880 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
nSTAND3
AAA_29
AAA_28
Adeno_IVa2
nSTAND_NTPase5
Rad17
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEB29382
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Position
704564..707188
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AA seq
874 aa
AA seq
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MPQKTKQTPMMEQYLGIKANYPDAFLFYRLGDFYELFNEDAIKASQLLEVTLTSRNRNAD
EPIPMCGVPYHAAKGYIDSLIERGYKVAICEQVEDPKTAKGMVKREVVQLITPGTAMDTK
SMDAKTNNYLAAIMGTNTDHYHLAYADLSTGELKTTKLNSLEAVMSELMSLKAKEVVFKE
AMEVDVQAELETKLGIMVSTQKEMIERAEFSYLTSEIENSDLIDVVKLLFSYLYVTQKRN
LGHLQKVEVYSPTNYLKMDHYSKHNLELVSSIRTGQKKGTLLWLLDETKTAMGGRLLKQW
IDRPLIQEQQIMMRQNIVESLINHFFERTDLNEALTRVYDLERLAGRVAFGNVNGRDLIQ
LQTSLLQIPQLIEIIQLMNKGEWDQLITELDQVPEVVQLIDQAIDENAPLSIKDGGVIKD
GFNEQLDIYRDAMRNGKKWIAQLEAEEKAATGIRNLKIGYNRIFGYYIEITKANLANLPE
GRYERKQTLANAERFITPELKEKEVLILEAEEKSMLLEYTLFAEVRETIKDYIERLQNLA
KTVAAIDVLQSFATISEKYHYTRPLMAANSQEISLIEGRHPVVEKVLGQQTYVPNSVEMD
QDNEILLITGPNMSGKSTYMRQLALTVIMAQMGCFVPADKAIMPIFDQIFTRIGAADDLI
AGQSTFMVEMMEANEALRYASKNSLILFDEIGRGTATYDGMALAEAIIEYIHENVHAKTL
FSTHYHELTVLDERLTRLTNVHVGAVEEEGELVFLHKMLPGPADKSYGIQVAKLAGLPDD
LLSRAAVILEQLEQKEEIVLNRSTQIASAKETSIPSKSSQKEKVEEKDEGQLSLFGLLED
SETEVVKAVRKMNLLTMTPLEALNCISEWQQKLN
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
gtgccacaaaaaacaaaacaaacgcctatgatggaacagtatctagggataaaggcaaat
tacccagatgcttttttgttttatcgtttaggcgatttttatgaactatttaatgaagat
gctattaaagcttcgcaacttttagaagttacgttaacgagtcgaaaccgtaatgcagat
gaaccgattccaatgtgtggtgttccgtatcatgcagcaaaagggtacattgacagctta
atagaacgaggatacaaagtagccatttgtgaacaagtagaggatccaaaaacagcaaaa
ggtatggtgaaaagagaagtcgttcagttaattacacccggaacagctatggatacgaag
tctatggacgctaaaacaaataattatttggctgctataatgggtacaaatacagatcac
tatcatttagcgtatgctgatttaagtacaggagaattaaaaacaacaaagttaaattca
ttagaagcggtaatgagcgaattaatgagtttgaaagcaaaagaagttgtttttaaagaa
gcgatggaagtagatgtacaagcggaattagaaacaaagttaggcattatggtatctact
caaaaagaaatgattgaacgcgcagaattttcttacctgacaagtgagattgagaacagc
gacttgattgatgttgttaagttattattttcttatttatatgttacccaaaaacgaaat
ttaggtcacctacaaaaagtagaagtttattctcctactaattatttgaaaatggatcat
tattctaagcataatttagaattagtttcttcgattcgtacaggacaaaaaaaggggact
cttttgtggttgttggatgaaaccaaaacagccatgggtggaaggcttttaaagcaatgg
attgatcgacctctcattcaagaacaacagatcatgatgagacagaatattgttgaaagt
ttaatcaatcatttctttgaaagaacagatctaaatgaagcgttaacgagagtgtatgat
ttagaaaggttagctggtagggtagcatttggtaatgttaatggacgcgacttaattcaa
ctccaaacgtcgttgcttcaaatccctcagttaattgagattattcagttgatgaacaaa
ggtgaatgggatcaattgattactgaattagaccaagttcctgaagtcgttcagctgatt
gatcaagcaatagatgaaaatgctcctctttctataaaagatggtggagtcattaaagat
ggattcaatgaacagttggatatttaccgtgatgctatgcgtaacggtaaaaaatggatc
gctcagttagaggctgaagaaaaagcagcaacaggcattagaaacttgaaaattggctac
aaccgaatctttggttactatattgagataactaaagccaaccttgctaatttgcctgaa
gggcgttatgaacggaaacaaactttagcaaatgctgaacggtttattactccagaatta
aaggaaaaagaagttttaattctagaagctgaagaaaaatccatgcttctagaatacacc
ttatttgctgaagttagagaaacgattaaagactatattgaacgattgcaaaacttggcc
aaaacagtagccgccattgatgtgttgcagagttttgcaacgataagcgaaaaataccat
tatactcgtcctttaatggctgctaatagtcaagaaatcagtttgatagaaggaagacat
cctgttgttgaaaaagttctgggacaacaaacgtatgtgccaaatagtgttgaaatggat
caagataatgaaatcttacttattactggaccgaatatgtctggtaaaagtacgtatatg
aggcaattagcgttaaccgttattatggctcaaatgggctgttttgttcctgctgataaa
gcaataatgccgatatttgatcaaatatttacccgaattggagcagcagatgatttaatt
gcaggtcaaagtacctttatggttgaaatgatggaagcgaatgaagctttgcggtacgct
tcaaagaacagcttgattttatttgacgaaattggacgtggaacagccacttatgacggt
atggctttagcggaagctatcattgaatacattcatgaaaatgttcacgcaaaaacgtta
ttttcaacacattaccatgagttaacagtgttagatgagcgactgactcgtttaacaaat
gttcatgtaggtgcagtagaagaagagggagaattagtctttttacacaaaatgcttcct
ggtcctgcagataagagttatgggattcaagtagctaaacttgctggacttcctgatgat
ttgctttcacgtgcagctgttattttagaacaactggaacaaaaagaagaaattgtgtta
aaccgctctactcaaatagcttcagctaaagaaacgtcaattccaagtaaatcttctcag
aaagaaaaagttgaagagaaggatgaaggacagctttctttattcggactgctggaagat
tctgaaactgaagtcgttaaagctgttcgaaagatgaatttattaacaatgacccctcta
gaagcattgaattgcattagtgaatggcaacagaaattgaactga
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