Carnobacterium sp. 17-4: CAR_c08120
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Entry
CAR_c08120 CDS
T01452
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn00300
Lysine biosynthesis
crn00470
D-Amino acid metabolism
crn01100
Metabolic pathways
crn01110
Biosynthesis of secondary metabolites
crn01120
Microbial metabolism in diverse environments
crn01230
Biosynthesis of amino acids
Module
crn_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CAR_c08120 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CAR_c08120 (dapF)
Enzymes [BR:
crn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CAR_c08120 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
NifU_N
Motif
Other DBs
NCBI-ProteinID:
AEB29506
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All DBs
Position
840800..841780
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AA seq
326 aa
AA seq
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MQVDLIKVHGSENEFFILDETLLERTLTQDELVSLTQIITDRNKGLLKGADGVLLIGTTN
HKETDGSMRVINYDGSEASMCGNGLRTVARYLSEKNKKNEFVVETMHADLHVKKAEELGK
DIQTFQVEISPVSFNVENLPFNWESEKFIDQELSELATNLRFSAVAVPNPHLISFVDHET
LYSSQFEDLATYLNGKNPYFPDGVNVSFVEVLDKQSLFVRTFERGVGFTNACGTAMAASS
LMYVLLKNGQLEEKIQVTNPGGMVQTVVHKDEDGTYWMDLIGNATYLNKVSISLEDILTH
NLGNHTQVALDENENYHNFLKQITID
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtagacttaattaaagttcatggatcagaaaatgaattttttattttagatgaa
acattgctcgaaagaacattgacacaagatgaacttgtatctctgactcaaatcattaca
gatcgcaataaaggtcttctaaagggcgctgatggtgttcttttaataggaacaactaat
cacaaagaaacagacggaagcatgagagtaatcaattatgatggtagtgaagccagtatg
tgtggcaatggattaagaacggttgcgcgttatctttctgaaaaaaataaaaaaaatgag
tttgttgttgaaacaatgcatgctgatcttcacgtaaaaaaagcagaagagttaggaaaa
gatattcaaacttttcaagttgaaatttctccagtatcttttaatgtagaaaatttgcca
tttaattgggaatcagaaaaatttattgatcaagaattatcagaattagctactaatttg
cgtttttctgcagttgcagtgccaaatcctcatttgatcagttttgttgatcatgaaaca
ttatacagctcacaatttgaggaccttgcaacctatttaaatggaaaaaacccttatttt
cctgacggagtaaatgttagctttgtagaagtattggataaacaatcactatttgtccgt
acttttgaaagaggagtaggctttacgaatgcttgcggtaccgcaatggcagcgagtagt
ttgatgtatgtgttgttaaaaaatggccaacttgaagaaaaaattcaagtgactaatcct
gggggaatggttcaaacggttgttcataaagatgaagatggaacttactggatggattta
attggaaatgcaacgtatctaaataaagtttctatctcattagaagatattttaactcat
aatctaggtaatcatacacaagtagctcttgatgaaaatgaaaattaccataatttttta
aagcaaattacaattgattaa
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