Carnobacterium sp. 17-4: CAR_c08820
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Entry
CAR_c08820 CDS
T01452
Symbol
yfiC
Name
(GenBank) putative ABC transporter
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CAR_c08820 (yfiC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crn02000
]
CAR_c08820 (yfiC)
Transporters [BR:
crn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CAR_c08820 (yfiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_21
AAA
RsgA_GTPase
AAA_30
NTPase_1
DEAD
Zeta_toxin
AAA_16
MMR_HSR1
AAA_23
TsaE
AAA_7
SMC_N
nSTAND3
AAA_14
nSTAND_NTPase5
AAA_29
DO-GTPase2
AAA_24
cobW
ATP-synt_ab
DUF87
T2SSE
FKBP_N_2
Dynamin_N
NACHT
Collagen_mid
Nbl1_Borealin_N
AAA_19
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AEB29576
LinkDB
All DBs
Position
912098..913864
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AA seq
588 aa
AA seq
DB search
MKGSLRRIWQYIKPYKIGFLSAIALTVVCMIVNALQPYIIGLAMTELGKNVSDMLNNVPN
AGVNFPYIRNIVIIILGMAAIYQITLYLSSYIMTNVVQNTMRDLRNEIELKINRLPVSYF
DRNQQGNILSRVTNDVDSISNAMQQSLIQMVNSFMGIAFAITMMLYISVPLAIVIMVTIP
LSFIISKAIIKKSQPYFKGQQESLGAMNGHVQESFSGFTEIKLYGKEKDKLEEFKEINAT
LNNYGFKAAVISGIMSPLVGFVSNLAYFGIAVGGGYLVIMGSLSLGNLQAFTQYIWQVNQ
PISQITQLSGVIQSAAAAVNRVFEILDEPEEIINEKDYVLPATIEGNVDFEHVAFGYDKE
KPLITDLNVSVKKGQTVAVVGPTGAGKTTLINLLMRFYDVDKGAIKIDGIDTKSMSRQDV
RSLFGMVLQDAWVYSGTIAENIRFGKLDATDEEVVEAAKTANVDHFIRTLPDGYNMKLNK
ETSNVSLGQKQLLTIARAVISNPKILILDEATSSVDTRLESLIQKAMKKVMEGRTSFVIA
HRLSTIRDSDLILVMDQGEIIEQGTHEELLEKGAFYANLYNSQFSEEE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggttcattacgccgaatttggcagtatatcaaaccgtataaaattggtttccta
tctgctatcgcactaactgttgtctgcatgatcgtaaatgctctacagccttacatcatt
ggattagctatgacagagttaggtaaaaatgtttccgatatgttaaacaatgtgccaaat
gcaggagttaatttcccatatattcgtaacattgtaatcattatcttagggatggcagct
atttatcaaattaccttatatttatcttcgtatattatgacaaatgttgttcagaacact
atgcgtgatttaagaaatgaaattgaactaaagatcaatcgacttccagtctcttacttt
gatcgaaatcaacaagggaatatattgagccgtgtcacaaacgacgttgattcaataagt
aatgctatgcaacaaagtctaattcaaatggttaattcgttcatggggattgcgttcgct
ataacgatgatgttgtacatctctgttccgttagcgatagtgatcatggtgactattcca
ctttcttttattatttcaaaagccatcattaaaaaatcgcaaccttattttaaagggcaa
caagagtcattaggagcgatgaatggacatgtgcaagaaagttttagtggatttaccgaa
atcaaactttatggaaaagaaaaagacaaattagaagaatttaaagaaatcaatgcaaca
ttaaataactacggtttcaaagctgcggttatctctgggataatgagtcctttagtagga
tttgtatccaatctagcttattttgggatcgcggtcggcggcggatatttggttattatg
gggagcttgtctttagggaacttacaagcttttactcagtatatctggcaggttaaccag
cctatctctcaaattacacaattgtctggtgttatacaaagtgcggcagcagcggttaat
cgtgtgtttgaaattttagatgaaccagaagaaattattaatgaaaaagattatgtatta
ccagctactatagagggtaatgtagattttgaacatgttgcttttggttacgacaaagaa
aaaccattgatcactgatttgaatgtgtcggtgaaaaaagggcaaacggtagccgttgtt
ggtcctacaggggcagggaaaacaactttgattaatttattgatgcgcttctacgatgtt
gataaaggcgccattaaaattgatggcatcgatacaaaatcaatgtccagacaagatgtt
cgttcgttgtttggaatggttttacaagatgcttgggtttatagtgggacgattgccgaa
aatatccgctttggtaagttagatgcaaccgatgaagaagtggtggaagcagctaaaaca
gcgaatgtagatcattttattcgaacattgcctgatggatacaatatgaaactgaacaaa
gaaacttccaatgtttcgttaggacaaaaacaacttttgaccattgcacgtgcagtaatt
tctaatccgaaaatactgattctagatgaagcgactagttcagtagacacgcgtttagaa
agtttgatccaaaaagcgatgaaaaaggttatggaaggcagaacaagctttgtcattgcc
catcgcttgtccacgattcgagactctgatttaattttagttatggatcagggtgaaatc
attgagcaaggaacgcatgaagaactgcttgaaaaaggagctttttatgcaaatctatac
aacagccaatttagtgaagaagaataa
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