Carnobacterium sp. 17-4: CAR_c09730
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Entry
CAR_c09730 CDS
T01452
Symbol
priA
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CAR_c09730 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crn03400
]
CAR_c09730 (priA)
Enzymes [BR:
crn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAR_c09730 (priA)
DNA repair and recombination proteins [BR:
crn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CAR_c09730 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
PriA_3primeBD
DEAD
PriA_C
Helicase_C
Zn_ribbon_PriA
PIF1
AAA_30
AAA_19
SLFN-g3_helicase
nSTAND_NTPase5
T2SSE
Zn_ribbon_6
AAA_16
ATPase_2
Ligase_CoA
Motif
Other DBs
NCBI-ProteinID:
AEB29666
LinkDB
All DBs
Position
1000130..1002544
Genome browser
AA seq
804 aa
AA seq
DB search
MVSIAKVIVDVPTMQTNKPYDYRIPTEFEQDIVQGMRVAVPFGQGTRQVQGFVVEITHST
DYEGELKPIVGLMDLTAVLDEEMLLLGKEMARKTYAFQITCYQTMLPAILKAKYEKKIRL
IDEIPEDLFFELFKGKNEIKWEEAEERAILPQLIELKKKDAVEVIYEVKNQAKTKKKRMI
RANLSFEQFEDEKLTLGKRGPKQHLLLDVLQSLIEQTISVSELTKNTELTASDIRTGEKK
GWLTIEEVEVYRDPFKDKTFKKTVSFQLNEGQQNAIQPILKAVTEERTEVFLLKGVTGSG
KTEIYLQTIAQTLQNNKSALMLVPEIALTPQMVNHFKGRFGEEVAVLHSGLSVGEKYDEW
RKIERGEARVVVGARSSIFAPVKNIGVIIIDEEHEATYKQDENPRYHARDVAIWRANYHN
CPVILGSATPSLESRARAQKNVYTLLELPTRVNQKDLPDVEVVDMREELKNANRSSFSIL
LQEKIRDRIEKKEQIVLLLNRRGYSSFVMCRDCGFVLPCPNCDISLTLHMDTKTMKCHYC
GHEENIPHTCPSCKGSKIRYYGTGTQKIEEELRDVLPEAKVIRMDVDTTRKKGAHEKLLA
SFGNGEADILLGTQMIAKGLDFPNITLVGVLNADTGLGLPDFRASERTFQLLTQVSGRAG
RAELTGEVIVQTFNPEHYAIQLAKEHDYDTFYKQEMMLRHRGNYPPYFYTILITTSHEEE
IKAAKKMQQIVQHIKPQLQPETIMLGPTPKAVARMNNRYYYQTIIKYKSEPHLKAVLQTI
LVESQREMAKGLQIAIDSEPINFI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
gtggtttcaattgctaaagtaattgtggatgttccaacaatgcagacgaacaaaccttat
gattatcgtattcctactgaattcgaacaagatattgttcaaggaatgcgtgtggccgtt
ccgtttggtcaaggaactaggcaagtccaaggctttgttgtggagattactcactcaaca
gattatgaaggcgagttaaaacccattgttggtctaatggacttaacagcggttcttgac
gaagaaatgctgttgttgggcaaagaaatggcacgcaaaacttatgcttttcaaataacg
tgttaccaaacaatgttgccagctatattgaaagcaaaatatgaaaaaaaaattcgactc
attgatgaaattcctgaagacttattttttgagctatttaaagggaaaaatgagatcaaa
tgggaagaagcggaagaaagagctatcttaccgcagttgatcgaattgaagaaaaaagat
gctgttgaagtgatatatgaagttaaaaaccaagcaaaaacaaagaaaaaaagaatgatt
cgagcgaatttatcttttgagcaatttgaagatgaaaaactaactttaggcaaacgcggt
ccaaaacaacaccttcttctagatgtattgcaatcattaattgagcaaacaatcagtgtg
agtgaactcactaaaaatacggaacttacggcatcggatattcgaacaggtgaaaaaaaa
ggctggttaactattgaagaagttgaagtttaccgtgatccatttaaagataagaccttt
aaaaaaaccgtatcctttcaactgaatgaaggacaacaaaatgctattcaacctattttg
aaagctgtaacagaagaaagaacggaagtattcttgctaaaaggggtaactggaagtggg
aaaacagaaatctatttgcagaccattgcccagacacttcaaaacaataaaagtgctttg
atgctcgtacctgagatagcattgactcctcaaatggtgaatcattttaaagggcgcttt
ggagaagaagtagccgttttgcacagtgggttgtctgttggtgaaaaatacgacgaatgg
cgaaaaattgaacgcggtgaagctcgggttgtagtaggtgctcggtcatcaatttttgca
ccggttaaaaatatcggcgtgattattattgatgaagagcacgaagctacgtataaacaa
gatgaaaaccccaggtatcatgctagggatgtagcaatatggagagcaaattaccataac
tgtcctgttattttaggaagtgctacaccctcattagagtcgagagccagagcgcaaaaa
aacgtgtatacattgttggaactgccaacacgagtcaatcaaaaagacttacctgatgtt
gaagttgtcgatatgagagaagaattaaaaaacgctaatcgtagcagtttctcaattctt
ttacaagaaaagatacgagaccgaatagaaaaaaaagaacaaatcgttttactattaaat
agacgtgggtattcttctttcgtgatgtgtcgagactgcggatttgtcttgccttgtccg
aattgcgatatttcattaaccttgcatatggatacaaaaacaatgaaatgccattattgt
ggtcatgaagaaaatattccacatacttgtccaagttgcaaaggaagtaagatacgctac
tatggtactggaacgcaaaagattgaagaagaattaagagatgttttgccagaagcaaaa
gtgatccgcatggatgtggatacgacgcgtaaaaaaggggcacatgaaaagttgttagct
tcttttggaaatggtgaagcggacattttattgggtacacaaatgattgcaaaaggttta
gatttccccaatattactttggtgggtgttttgaatgcagatacaggattaggcttacct
gattttagagcgagtgagcggacattccaattgttaacacaagtaagtggacgtgctgga
agagctgaattaacaggtgaagtaatcgttcaaacgtttaatcctgaacattacgcgatt
cagctagctaaagaacatgattacgatacattctataaacaagaaatgatgttacgacat
cgtgggaattatccgccttatttctatacaattttgattacaactagtcatgaagaagaa
ataaaagctgcaaagaaaatgcaacaaatcgttcaacacattaagccacagttgcagccg
gagaccattatgttagggccaacaccaaaagcagttgctcgtatgaacaatcgctattat
taccaaacgattattaagtacaaaagcgaaccgcatttaaaggctgttttgcaaacaatt
ttagtggaatctcaaagagaaatggctaagggtttacaaattgctattgactcggagccc
ataaattttatctag
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