Carnobacterium sp. 17-4: CAR_c09880
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Entry
CAR_c09880 CDS
T01452
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crn03019
]
CAR_c09880 (rnc)
03009 Ribosome biogenesis [BR:
crn03009
]
CAR_c09880 (rnc)
03036 Chromosome and associated proteins [BR:
crn03036
]
CAR_c09880 (rnc)
Enzymes [BR:
crn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CAR_c09880 (rnc)
Messenger RNA biogenesis [BR:
crn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CAR_c09880 (rnc)
Ribosome biogenesis [BR:
crn03009
]
Eukaryotic type
90S particles
RNase
CAR_c09880 (rnc)
Prokaryotic type
rRNA processing factors
CAR_c09880 (rnc)
Chromosome and associated proteins [BR:
crn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CAR_c09880 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
AEB29681
UniProt:
F4BPZ6
LinkDB
All DBs
Position
1017263..1018000
Genome browser
AA seq
245 aa
AA seq
DB search
MKEHGEIFIERKNTMDDAFLTQLKTKFDLVFHDLSYLEEAFTHSSYVNEHRNLELKDNER
IEFLGDAVLELTVSRFLYELYPNLPEGKLTRLRATIVCEASLSQFAKEYEFDQFIRLGRG
EERMNGRKRPALLCDLFESFIGALYLDQGIDSVLSFLDQTIFPKIKSGAFSHVMDHKTNL
QEFLQQKGEIGIDYQLVDEIGPAHQKAFVVEVLAEGQVLGQGQGKTKKAAEQVAAENALL
ALQEK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagcatggagaaatttttatagaaaggaagaatacaatggatgacgcattttta
acacaattaaagactaaatttgatttggtttttcatgacctatcatatttagaagaagca
tttacccattcatcatatgtgaatgagcacaggaatcttgagttaaaggataatgaaaga
attgaatttttaggagatgcggtattagaattaaccgtatcaagatttttatacgaatta
tatcctaacttgcctgaagggaaattaacacgattgagagcgactattgtttgtgaagct
agtttgagtcaattcgcaaaagaatacgaattcgatcaatttatccgtttaggtagaggc
gaagaacgtatgaatggacgaaaacgtccagcattactttgcgatttatttgaatccttt
attggagcgttatatttagatcaaggaatagatagcgtattatcttttcttgatcaaacg
atttttccaaaaatcaagtccggtgctttctcacatgtgatggatcataaaactaattta
caagagtttttacaacaaaaaggtgaaattggaatcgactatcaattagttgatgaaatt
gggcctgcacatcaaaaggcctttgtggtagaagtacttgctgaagggcaagtacttgga
caaggacaagggaaaactaaaaaagcagctgaacaagtggctgcagaaaatgcattgctt
gctttgcaagaaaaatag
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