Carnobacterium sp. 17-4: CAR_c10130
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Entry
CAR_c10130 CDS
T01452
Symbol
ripX
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crn03036
]
CAR_c10130 (ripX)
Chromosome and associated proteins [BR:
crn03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CAR_c10130 (ripX)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
DUF5738
Phage_integr_3
DUF3435
Motif
Other DBs
NCBI-ProteinID:
AEB29706
UniProt:
F4BQA1
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All DBs
Position
1045830..1046729
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AA seq
299 aa
AA seq
DB search
MKKLNEDVEEYIRFLTIERGLSKNTIESYKRDIRQYLVFIEQIKVTKWDQIDRYTVLSFL
QDLKEKEKSAGTIIRMISCLRQFHQFLKQEQISQSDPMLHIDTPKKAQKLPKVLSIKEVD
RLIETPNTGETLGLRDRAMLEVMYATGLRVSELTELKLDDLHLSLGLIQTIGKGDKERII
PLGDLAITWIEKYLRYSRTKLEKDGQRSPHLFLNHHGRKLTRQGVWKNLKIIVKKAGIEK
EVTPHTLRHSFATHLLENGADLRVVQELLGHSDISTTQIYTHITKKRMSSVYKTYHPRA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaattgaatgaagatgtagaagaatatatacgctttcttacaatcgaacgaggt
ctttcaaaaaatacaattgaaagctataaaagagatatccggcaatacttagtttttatt
gagcaaatcaaggtaaccaaatgggaccagattgatcggtacactgtgttgtcatttttg
caggatttaaaggagaaagaaaaatcagcaggtactatcattcgaatgatttcttgccta
agacaatttcatcagtttttaaaacaggaacaaatatctcaaagtgatccgatgctacat
atcgacacaccaaagaaagcacaaaaattaccaaaagtattgtcgatcaaagaagtagat
cgcttaatagaaactccgaatacaggagagacgctaggattaagagatcgggcaatgctt
gaagtaatgtatgcaaccggtttgcgcgtttctgaattaacagaattgaaattagatgat
ctgcatttatcacttggattaattcaaacaattggtaagggagataaagagcgaatcatt
cctttaggtgatctagcaatcacatggattgaaaaatatttacgatacagccggacaaaa
ttagaaaaagatggtcagcgctcaccgcacttattcctaaatcatcatggacgtaaattg
accagacaaggtgtatggaaaaacttgaaaataatcgtaaaaaaagctggaatagaaaaa
gaagtgacacctcatacgttgcgtcattcgtttgcgacacatttattagaaaatggagct
gatttaagagtggtgcaagagttgttaggtcattcagatatctccacaactcaaatatat
actcatattactaaaaaaaggatgtcaagcgtttacaaaacctatcatcccagagcttga
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