Carnobacterium sp. 17-4: CAR_c10920
Help
Entry
CAR_c10920 CDS
T01452
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crn03016
]
CAR_c10920 (truB)
Enzymes [BR:
crn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CAR_c10920 (truB)
Transfer RNA biogenesis [BR:
crn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CAR_c10920 (truB)
Prokaryotic type
CAR_c10920 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEB29785
LinkDB
All DBs
Position
1131092..1132012
Genome browser
AA seq
306 aa
AA seq
DB search
MEGILPLWKERGMTSHDCVFKLRKILKTKKIGHTGTLDPDVDGVLPICVGKATKVVEYMM
ETGKGYIGEITLGYSTTTEDRSGEIVEQVSVKTIPSLESIDKAMNSMVGKITQIPPMYSA
VKVNGKKLYEYARAGETVERPVRIADIKSFKRTSDLLVDEEQGTVSWKFEVACGKGTYVR
TLAVDLGANLGYPAHMSDLTRILSGTFKASDCLTLAQVAEKMEQQEIEEALFPLEFGLKE
LASFEIDQELWDKVKNGTVLPINTVPEELLSKPIVFMYLQKAVSIYAVHPRKKEYLKPIK
VLRNNL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtattctccccttatggaaagaacgtggcatgaccagccatgattgtgtattt
aaactcagaaagattttaaaaactaaaaaaattggacacacaggtacattagatccagat
gttgatggcgtgttgcctatttgtgttggaaaagcgacaaaagttgttgagtacatgatg
gaaacgggtaaaggttacataggtgaaatcacacttggctattccactacaacagaagac
cgcagcggagaaattgttgagcaagttagtgtcaaaactattccatcactggaaagtatt
gataaagctatgaatagcatggtgggaaagattactcagattccaccaatgtattctgct
gtaaaagtaaatggaaaaaaattgtatgaatatgctcgtgctggtgaaacggttgagcga
cctgttagaattgctgatataaaatcatttaaacgcacttcagatcttttggtagatgaa
gagcaagggacggtttcttggaaatttgaagtagcttgtggaaaagggacttatgtccgt
acgttagcagtggatctaggcgcaaatttgggttaccctgcgcatatgtcagacttaaca
cgtatactaagtggaacttttaaagccagtgattgtttaaccttagcgcaagttgctgaa
aaaatggaacaacaagaaatagaagaagctttatttcctttggaatttggcttgaaagag
ttggcttcttttgaaattgatcaagagctttgggataaagttaaaaatggcacagtactc
ccaataaatactgtgcccgaagagttattgtctaagccaatcgtctttatgtatcttcaa
aaagctgtcagtatttacgcagttcacccgcgaaaaaaagagtatttaaaaccaattaaa
gtgttacgaaataatttataa
DBGET
integrated database retrieval system
