Carnobacterium sp. 17-4: CAR_c11600
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Entry
CAR_c11600 CDS
T01452
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CAR_c11600 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crn03400
]
CAR_c11600 (recO)
DNA repair and recombination proteins [BR:
crn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CAR_c11600 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CAR_c11600 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AEB29852
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Position
1200403..1201212
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AA seq
269 aa
AA seq
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MAQVEEVEGIVLSVRNHRENDQLVKLFTNRFGKRMFFVKGTRKQKNKLRTAVLPFTKATY
IADIRDTGLCFIRDAKEVDQYKSMQTDIFLNAYATYILNLADAALDDGIVDSTLFHKIDR
CLTEIDEETDPEIVVNIFEIQILPYFGVSPELRGCRVCGNTEGPFDYSGSYGGLLCQNHW
HLDRHRYHASRRAIHFIRLFSVVSLDQLGAITVKEETKREIRTLIDLIYEESVGIKLKSK
KFIDQMYTWGNLLIDKRVPPNETPDENEK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtagaagaagtagaaggcattgtgctatctgtgcgaaatcatcgcgaaaac
gatcaattagttaaattatttactaatcgctttggcaagagaatgttttttgttaaagga
accagaaagcaaaagaacaaacttagaactgcggtgttgccatttacgaaagcgacgtat
attgcggacattcgtgacactgggctttgttttataagagatgcaaaagaagttgatcag
tataaaagtatgcaaaccgatattttcttaaatgcttatgcaacgtatattttgaattta
gcagatgcagctttagatgatggaattgtggatagtacgttatttcataagatagaccgg
tgtttaaccgaaatcgatgaagaaacggatcctgagattgtcgtgaatatatttgaaata
cagattcttccatactttggtgtttcgcccgaattaagaggctgtcgggtatgcgggaat
actgagggaccttttgattactcaggcagttatggtggcctactatgccaaaatcattgg
catttagatcgtcaccgttaccatgcaagcagaagagcgattcattttattcgtttgttt
tcagtggtctcgttggatcagttaggtgctattacagttaaagaggaaacaaagcgagag
atcaggacgttgattgacctcatctatgaagagtctgtcggaataaagttgaaaagtaaa
aaatttatcgatcaaatgtatacttggggtaacctcctaatagataagagagttcctccg
aatgaaacaccagacgagaatgaaaagtaa
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