Carnobacterium sp. 17-4: CAR_c11750
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Entry
CAR_c11750 CDS
T01452
Symbol
addB
Name
(GenBank) ATP-dependent deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crn03400
]
CAR_c11750 (addB)
Enzymes [BR:
crn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAR_c11750 (addB)
DNA repair and recombination proteins [BR:
crn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CAR_c11750 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AEB29867
UniProt:
F4BR71
LinkDB
All DBs
Position
1216698..1220318
Genome browser
AA seq
1206 aa
AA seq
DB search
MGLQFVLGRANRDKRSVLLDEIAESLTKQTEESIFYLVPDHIKFQAEMTILEKLSHYPYF
EKKPIMGMMHLQVFSFTRLAWYWLKDTDIYAKPQLTTTGLSMLIRKLLIEHEEELTIYRG
EVRKDGFVQQMTDLFLELRSGRIAQADLNHMMFSLGTSPKEADFKLKLQDLSLIYQAFDA
ALLNKYIESEDIVSALIQKVEELDLSQTTFYIESYYQFTAQEQALILALMKAAKKVTIAL
TSDKAYAVEKPEMHNLFQTSGATYYKLYQLARQNNVPVYKDKLIQEVDEAYCGELNQLEE
FWVETSQLTPANNERVDGLDAMGNCIEIWAAENRQAEITHVAKEIRKLVATGNYRYKDIL
VLTRNMDDYLAIIEPLFSSHDIELFVDSAELMNQHPLIEVIDSLVSIYKRNWRYADVMRL
LRTELVIPKSEGEEVLSKERAQRVSQQVHRARQFRERVDVTENVLLSYGYEGYQWTKSDP
WHYTRYFYEDAEFQSDNDQRIEQIANSIKTDLTGLLVPFFNRLEKAQTSKDAAKELYVFM
ENIGVKDQIGFWRDQAIEDNDLEEARKHEQTWQTFLQLLDEYVEVLGEEPFNLDSFYAIL
MTGFDNATYSMVPPSIDQVTFSGIEGTRIGTAKVTFMLGVTDAHLPAKTENKSILTEEDR
DFFSQFLDDTKYLKPTVEAVMASEPFIAYQAFLDSSEKLIFSYPTSDETKNGPKLSPYVD
RIAKAFHLPIQAKLMDVTSLENPSDKELMDFVGTKKTTISQLLMILRKEQDQKGQLSLFW
QNLYTFFKRDKQVARDFNHLLVSLVKKNLPVPLKSTIATDLYGKDLYLSVSRLEAFYADH
YGHFLTYGLKLQERDVFELSPAGTGEFFHDALDHLFKQIIQKNLSFDQLTEDMLEQLTSE
VLTELYGKPKFSILNASNRMKYIRDQLGQTIKKMVWVIGNQSRRTNMKNVQTEVLFGQVA
NQTGIEGLSFPLNNGGTLHLRGKIDRVDAMNLGDDYYLSVVDYKSSAHKFNYQDAYYGLA
MQMITYLDTALQNAVGLIGHEAKPAGAFYLHVSNPFMKKGTFLDEDAYINELLKSYKMDG
LLLEDEDMLLSLDPTIEPTKTSLVYPFNQLKSEALKSNKFVTLDEMTALRQHNQKLIVDA
GNKIVEGVNTLNPFYEKRQFIPTVNGPLRAVSQFDAMLPENNYRRMESLKREDILKKMQE
EEEDEE
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgggattgcaatttgtgttaggccgtgcgaatcgtgataaacgttcggtactattggat
gagatagcagaaagcctgactaaacaaacggaagagtctattttttatttagttccggac
catattaaattccaggctgaaatgaccattttagaaaaacttagtcactacccttatttt
gaaaagaagccgattatgggtatgatgcatttacaggtatttagttttacacgattagcg
tggtactggttaaaagatacagatatttacgctaagccacaattaaccacaacaggttta
tcgatgctgatccgtaaattattgatcgaacatgaagaagagttaaccatctaccgtggt
gaagtccgcaaagatggatttgttcagcaaatgacagatctgtttttagaattacgcagc
gggcggattgcacaagcagatttgaatcatatgatgtttagtctaggtacttcacctaaa
gaagcggattttaaattaaaattacaagatttatccttaatttatcaagcttttgatgca
gctttattgaataaatatatcgagtctgaagatatcgtgtccgcgctgattcaaaaagtg
gaagagttggatttatcccaaaccacattttacattgagagttactatcaatttactgct
caagaacaagcacttattttggccttaatgaaagctgctaagaaagtgacaatcgcgctg
acgtcagataaagcatatgccgttgaaaaaccggaaatgcataacttgtttcagacatcc
ggagcaacctattataaattgtatcaactggcacgccaaaataatgttccagtctacaaa
gacaagctaatccaagaagttgatgaggcttattgtggggaattaaatcaactggaagaa
ttttgggttgagactagccaattgactcccgcaaacaatgaacgagtagacggtcttgac
gcaatgggcaattgtattgagatatgggctgcagagaatagacaagcagaaatcacacat
gtggccaaagaaattcgtaaattggtcgccactggcaattaccgttataaggatatttta
gtattgactcgtaatatggatgattatttagccatcatagagccattatttagcagtcac
gatatagagttattcgttgatagtgcagaattgatgaatcaacatccgcttattgaagtg
attgactctttagtcagcatttacaaacgcaattggcgatacgcagatgtgatgcggctt
cttagaacagagttagtaattccgaaaagcgaaggggaagaagttctttcaaaagaacgc
gcacaacgggtgagtcagcaggtgcaccgtgcacgacagtttagagaacgagtggatgta
acggaaaatgtattattatcttatggttatgaggggtaccaatggaccaaatcagatcct
tggcactacacacgctacttctatgaagatgccgagtttcagtcggataatgatcagcgg
attgaacagattgccaattccattaaaacggatctgacagggctgttggttccattcttc
aaccgattagaaaaagcgcaaaccagtaaagatgctgcaaaagaactgtatgtatttatg
gaaaatattggagttaaagatcaaataggcttttggagagatcaagcgattgaagacaac
gatcttgaagaagcacgcaaacacgaacaaacatggcaaacttttttgcaacttttagat
gaatatgtagaagtgttgggagaggaaccgttcaacttggatagtttctatgcgatctta
atgactgggtttgataatgcaacttatagcatggttccaccaagtattgatcaagtaact
ttttcaggtattgaaggaacacgtattgggacagcaaaagttacgttcatgttgggagta
accgatgcccacttgccggctaaaacagaaaataaaagtattttaactgaagaagaccgg
gatttcttttcacaattcctagacgatacaaaatatttaaaaccaactgttgaagcggtt
atggcttctgaaccgtttattgcttatcaagcctttttagattcttctgagaaattgatt
tttagttacccgaccagcgatgaaacgaagaatggtccgaaattatcgccttatgtggac
aggatagcaaaagcgtttcatcttccaatccaagccaaattgatggatgtcacatcacta
gaaaatccatccgataaagaattaatggattttgttggaacgaaaaaaacaacaatcagt
cagttgttgatgattttgcgcaaagagcaagaccaaaaaggtcagttaagtttattttgg
caaaatctttatactttctttaaacgagataaacaagtggctcgtgactttaaccattta
cttgttagtttggttaagaaaaacctaccagtacccttgaaaagtaccattgcaacagac
ctgtatggcaaagatctctatttatctgtttctcgtttagaagctttttatgcagatcat
tatggtcatttcttgacatatggattgaagttacaagaacgagatgtttttgagctgtct
ccagccggtacgggagaattctttcatgatgcgttggatcacttgtttaaacagataatc
caaaagaatctcagctttgatcaattaacggaagacatgctggaacaattgacatcagaa
gtgctaactgaactttatggaaaaccgaaattctccattttaaatgcttcaaatcgcatg
aagtatattcgtgaccaactaggacaaacgattaaaaaaatggtgtgggtcatcggcaat
caaagccgacggacaaatatgaaaaatgttcaaacagaagttttattcgggcaagttgcg
aatcaaaccggcattgaaggattatcttttccacttaacaatggtggaaccctacattta
cgtggaaaaatcgatcgagtggatgccatgaacttaggtgatgactattacctaagtgta
gtagattacaagtcaagcgcgcataaattcaattaccaggatgcttattatggtctagcc
atgcaaatgatcacgtacttggatacggctcttcaaaatgctgttggattgattggacat
gaagctaaacctgcaggtgcgttttatttgcatgtatccaatccatttatgaaaaaagga
acatttttagatgaagacgcatatatcaatgagttgttaaaatcctataaaatggacgga
ttgttgcttgaagatgaagatatgctcttgtcattagatccaacaattgaaccgacaaaa
acctcacttgtgtatccctttaatcaattgaaaagtgaagctttaaaatcgaacaaattt
gtcacgctagatgaaatgactgcgttacgccaacacaatcaaaaactgattgttgatgcc
ggcaataaaatcgtagaaggagtaaatacattgaatcctttctatgaaaaaaggcaattt
attcctaccgttaatggaccattacgtgcggtttcacaatttgatgcgatgttgcctgaa
aataattatcgtcggatggaatcgttaaaaagagaagatatacttaagaaaatgcaagaa
gaggaggaagatgaagaatga
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