Carnobacterium sp. 17-4: CAR_c12020
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Entry
CAR_c12020 CDS
T01452
Symbol
xynB1
Name
(GenBank) xylan 1,4-beta-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn00520
Amino sugar and nucleotide sugar metabolism
crn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
CAR_c12020 (xynB1)
Enzymes [BR:
crn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
CAR_c12020 (xynB1)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF5005
Flagellin_D3
Motif
Other DBs
NCBI-ProteinID:
AEB29894
UniProt:
F4BR98
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Position
complement(1245599..1247119)
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AA seq
506 aa
AA seq
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MKFKNPIISGFYPDPSICRVENDFYLVTSTFEYFPGVPIFHSTDLVNWDQIGHCLTTTQQ
LPLNDTPSSCGIYAPTIRYHEGVFYVVTTNVLEGGNFFVTAINPAGPWSEPIWFENSQGI
DPSLFFDEDGKCYLTGTSGNHEKSGIYQVEIDIKTGKYLSERKFIWEGTGGAFPEGPHLY
KIGKYYYLMISEGGTEYGHMLTISRSKNLYGPFESYEGNPIMTHRSKNHPIQATGHADLV
QHTDSSWWAVFLAFRPIGYPKKHHLGRETFLAPITWTEAGWPIVGDNGIIGEEIESESIT
SAQHVEWKERDDFDQSVLDFKWIFRRNLLKENYLLNGEEGFLSLIGSSATLRDTATHTFV
GRRQEHFDCEISTSLQFKPQDSEEAGLTIFANENFHYEIGLRNMNGKTEVFFRKNIGSIS
VIEKQLDYEENTIEFRIISDAECYSFEIVSPTGDVTSLGTGECGLLSTEVAGGFTGNVFG
LYATGNGEQSRNEARFNWFNYKIARK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaaaaatccgattatcagcggcttttacccagatccaagcatttgcagagtg
gaaaacgacttttatttagtgaccagtacattcgagtattttcctggtgtaccgattttc
catagtaccgatttagtgaattgggaccaaataggtcattgtttaacgacaacacaacag
ttacctttgaatgatacaccaagttcttgtggaatttatgcacctacgattcgttatcat
gagggtgtattttatgttgtgacaacaaatgtattagagggtgggaactttttcgttaca
gctatcaatccagccggcccatggtcagaacctatttggtttgaaaatagccaaggaatt
gatccgtcgctattttttgatgaggacggcaaatgttacctaactggaacaagtggcaac
catgaaaaatctggtatctatcaagtggaaatcgatataaaaactgggaaatacttatct
gaacggaaatttatttgggaaggaactggcggagctttcccggaagggccacatctttat
aagatagggaagtattattacttaatgatttcagaaggaggaacagagtacgggcacatg
ctgacgatttctagaagtaagaatctctatggaccctttgaaagttatgaagggaacccg
atcatgacccatcgtagtaagaatcatccgatacaagcaaccggtcatgctgatttagta
caacatacagatagttcttggtgggctgttttcttagcatttagaccaattgggtatcca
aagaaacatcatttaggacgcgaaacattcttagctcccataacgtggacagaagctgga
tggccaatagttggagacaacggcattattggtgaagaaattgaaagtgagtctattaca
tcagcacaacatgtggaatggaaagaacgagatgattttgatcaatctgtattagatttt
aagtggatcttcagaagaaacctgcttaaagaaaattatctattgaatggtgaagaaggt
ttcttaagtttgattggttcgtcagcaaccttaagagatactgcgacacatactttcgtt
ggtcgccgacaagaacattttgactgtgaaatttcaacatcgcttcaatttaaaccgcaa
gattcagaagaagctggactgacgatttttgctaatgaaaatttccattatgaaatcggt
ctaagaaatatgaacggaaaaacagaagtctttttcagaaaaaatattggttcaataagt
gttattgaaaaacagttggattatgaagagaatacaattgaattccgtatcatatctgat
gctgaatgctatagctttgagatcgtttcgccaactggtgacgtcactagtttagggact
ggagaatgcggcttgttgtcaaccgaagtagcaggtggatttacagggaatgtctttggg
ttatatgcaactggtaatggtgaacaaagccgcaatgaagctcgattcaactggtttaac
tataaaatagctagaaaatag
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