Carnobacterium sp. 17-4: CAR_c13270
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Entry
CAR_c13270 CDS
T01452
Symbol
pbpA
Name
(GenBank) transpeptidase
KO
K21465
penicillin-binding protein A
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn00550
Peptidoglycan biosynthesis
crn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CAR_c13270 (pbpA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
crn01011
]
CAR_c13270 (pbpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
crn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CAR_c13270 (pbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AEB30018
UniProt:
F4BRU8
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All DBs
Position
complement(1366788..1368815)
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AA seq
675 aa
AA seq
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MLILRLGYLQIVKGEEFETEVQRTETTLATGTVPRGEIYDSQHRKLVGNEALQAITYTRG
KGVSSEDMAKIAMNLAQYIEMPNVTEFEQDSDFDLSKRDLKDFWIALDEDKVNKRISDEQ
KETLSGSELYQLQVDKVTDEDIQFSEEEQEAAAIFKRMNGGYALSTINIKSENVTNDEIA
KVSENLLTLPGIDTGTDWVRTYPEGNMLRSILGDVTSESEGLPENKAATYLAQGYARNDR
VGKSYLELEYEEVLSGSKSKSETESNQNGDIVNTIQSYAGEKGDNLVLTTDMDFQKIVQD
IAKQSVATESEGLNNSIYVVAADPNNGEILAMTGQKRNAKTGEIDDATLDIINSSFQMGS
VVKPATVLAGYMDGAITLADNTLIDEPLMIRGSNTISSVFNRSGSVAVNDISALERSSNV
YMSKIALRMGGEYDYYRNMALDIDYRAVIKKLRSYYAQFGLGIKTGIDLPGEGSGFIGTA
ENPGLALTFAFGQYDTYTPIQMLQYVSTIANGGKRIAPRLIDEIRETDANGNMGAIQTQL
ETEVLNIVDVGKEEMSRVQQGMYQVANGANGSATSYFAGTEYTVAGKTGTAEAFYDGVVE
NRKGESVTNRTFVGYAPYDNPEIAVFVIVPYLPNTNSNHENTIVARKVFDAYFQVGEYKE
LSGEIAEDHDENTEE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgttgatccttagattgggttatttgcaaattgttaagggtgaagaatttgaaacagaa
gttcagcgaactgagactactttggcaactggaaccgttcctcgaggtgaaatttacgat
agtcagcaccgtaaattagtcggaaatgaagctcttcaagcgattacttatactagaggt
aaaggtgtttctagtgaagatatggcaaaaatcgctatgaatttagcgcagtacatcgaa
atgccgaatgttacagaatttgaacaagatagtgattttgatttgtcaaaacgagactta
aaagatttttggattgctctagatgaagacaaagtgaataaacgcataagcgatgagcaa
aaggaaactttaagcgggtcagaactttatcaacttcaagtagataaagtgacagatgaa
gatattcagttttcagaggaagaacaagaagcagcagctatttttaaacgaatgaatggc
ggttatgctttatcaacaatcaacattaaaagcgaaaatgtgacgaatgacgaaatcgca
aaagtaagtgaaaatcttttgacattacctggaattgataccggtacagattgggtcaga
acgtatccagaggggaacatgcttaggagtatccttggagatgttacaagtgagtctgaa
ggtcttccagagaataaggcagcgacttatttagcacaaggatacgcacgtaatgaccga
gtcgggaaaagttaccttgagttggaatatgaagaagtgttaagcggatcaaaatcaaaa
tccgaaactgaatcgaatcaaaatggagatatcgtcaacacgatccaaagttatgcgggt
gaaaaaggcgataatcttgttttaacaactgacatggattttcaaaaaattgttcaagat
attgctaagcaatctgtagctactgaaagcgaagggctgaataacagtatatatgttgtg
gcagctgatccaaacaatggtgaaattttagcgatgactggtcaaaaacggaatgcaaaa
actggtgaaattgatgatgctacattagatattattaattcaagttttcaaatgggttca
gtagtcaaaccggcaactgtactggctggatatatggatggagctatcaccctggcagat
aacacgttaattgatgaacctttaatgattagaggtagtaacactattagttcagttttt
aatcgttctggcagtgtcgcagtaaatgatatttcggcactggaacgttcttcaaatgtt
tatatgtcaaaaattgctctgcggatgggcggagagtacgattactatagaaatatggcg
ttagatattgattacagagcagttataaaaaaattgaggagttattatgctcaatttgga
ttaggtataaaaacgggaattgacttaccaggtgagggttctggattcataggaaccgca
gaaaatccaggtttagccttaacatttgcatttggacagtacgatacgtatactccaatt
caaatgctgcaatatgtttcaacaattgcaaatggtggaaaaaggattgcccctcgtttg
atagacgaaattagagagacggatgcaaatggaaatatgggcgctattcaaacgcaattg
gaaacagaagttttgaacattgttgatgttggaaaagaagaaatgagtcgtgtgcaacaa
ggaatgtatcaagtagctaatggggcaaatggttcagccacaagttactttgcggggact
gaatacactgttgccggtaaaacaggaactgctgaggcgttctatgatggagttgttgaa
aacagaaaaggggaaagtgtaacaaatagaacttttgtggggtatgcaccatatgataat
cctgagatagcagtttttgttattgttccttatttaccaaatacgaatagtaatcacgaa
aatacaatcgttgctcgtaaagtttttgatgcctacttccaagttggcgaatataaggaa
ctttcgggggaaattgctgaagatcatgatgaaaacactgaagaatga
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