Carnobacterium sp. 17-4: CAR_c16250
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Entry
CAR_c16250 CDS
T01452
Symbol
yefA
Name
(GenBank) putative RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crn03009
]
CAR_c16250 (yefA)
Enzymes [BR:
crn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CAR_c16250 (yefA)
Ribosome biogenesis [BR:
crn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CAR_c16250 (yefA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Met_10
RrnaAD
Methyltransf_15
Methyltransf_25
PrmA
MTS
TRM
DOT1
Methyltransf_11
Methyltransf_32
N6_N4_Mtase
PCMT
Methyltransf_4
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AEB30283
UniProt:
F4BSL3
LinkDB
All DBs
Position
complement(1681038..1682414)
Genome browser
AA seq
458 aa
AA seq
DB search
MKADKIVPVKKNEKHTVKIEDLTHEGMGVARIQGYSLFIENALPGEQVEVKIHKTGKSFG
YAKVLNRLNSSEDRVVIQDENYTRVGITPLQHMRYPAQLNFKKQQVMNSMQRIAKLPEVP
VYDTIGMANPSGYRNKAQIPVRKINDKLTTGFFRKNSHEVIPMENFYIQDPKIDETIIAV
RDIMREYGVKPYNENENTGNLRHIIVRRGYYTGEIMIVLVTRTAKLFPTSKIIPDILEAI
PEVVSIVQNVNPKHTNVILGDDAIVLYGEDKFRDTLLGNTFEISHRSFYQVNPLQTEKLY
QTVLDFAELTGEETVIDAYSGIGTITLTLAKNAKHVYGIEIIEPAVENAKANAELNNIEN
VTFEAGAAEEVMVQWSEEGRTADLLVVDPPRKGLEKEFTEAVIAMKPTKMVYVSCNPATL
ARDLALLTEGGYTVKKVQPVDLFPQTTHVESVTLLVRD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagataaaatagtaccagttaagaaaaatgaaaaacacaccgttaaaattgaa
gatttaacacatgagggtatgggagtagcaagaatacaaggctactcactatttattgaa
aatgccttacccggtgaacaagtagaagttaagattcacaaaacaggaaaatcttttggt
tatgcaaaagtattgaaccgtttaaattcgagtgaagaccgtgtagtaatccaagatgaa
aattatacacgtgtaggcattacgccattgcaacacatgagatatccagcacaattaaac
tttaaaaaacaacaagttatgaacagtatgcaacgcatcgcaaaattaccagaagtaccc
gtatacgacacaattggaatggctaacccatcaggttaccgtaacaaagcacaaattccg
gtacgtaaaatcaatgacaaattgacaactggttttttccgtaaaaacagtcatgaagta
atcccaatggaaaatttctacattcaagatcctaaaattgatgaaacaatcatcgctgtc
cgtgatatcatgcgtgaatatggcgttaaaccatacaacgaaaatgaaaacactgggaac
ttgcgtcacattattgttcgtcgtggatactatactggcgaaattatgatcgtattagta
acaagaactgctaaattgttccctacaagcaaaatcattccagatattcttgaagcaatt
cctgaagttgtcagcattgttcaaaatgttaaccctaaacacactaatgtgattttaggc
gatgatgcaattgttttatatggcgaagataaatttagagatactttattaggtaacaca
tttgaaatttctcaccgttcattctaccaagtgaacccacttcaaactgagaaattgtat
caaactgttttagactttgctgaattaactggcgaagaaacagttattgatgcctacagc
ggaattggaaccattacgttaacgttagctaaaaacgctaaacatgtttatggaattgaa
ataattgaaccagcagtagaaaatgctaaagcaaatgcggaactaaacaatattgaaaat
gtaacatttgaagcgggagctgctgaagaagttatggttcaatggagtgaagaaggacgc
acagctgatttactagttgttgaccctccacgtaaaggtcttgaaaaagaatttactgag
gcagttattgcaatgaaaccaacaaaaatggtttatgttagttgcaaccctgcaacatta
gcacgtgacttagctttacttacagaaggcggctatacagttaaaaaagttcaacctgtt
gatcttttccctcaaacaactcatgtggaaagtgttactttgctagtccgcgactaa
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