Carnobacterium sp. 17-4: CAR_c17970
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Entry
CAR_c17970 CDS
T01452
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAR_c17970 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crn03019
]
CAR_c17970 (groEL)
03110 Chaperones and folding catalysts [BR:
crn03110
]
CAR_c17970 (groEL)
03029 Mitochondrial biogenesis [BR:
crn03029
]
CAR_c17970 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crn04147
]
CAR_c17970 (groEL)
Enzymes [BR:
crn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CAR_c17970 (groEL)
Messenger RNA biogenesis [BR:
crn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CAR_c17970 (groEL)
Chaperones and folding catalysts [BR:
crn03110
]
Heat shock proteins
HSP60 / Chaperonin
CAR_c17970 (groEL)
Mitochondrial biogenesis [BR:
crn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CAR_c17970 (groEL)
Exosome [BR:
crn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CAR_c17970 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
CAR_c17970 (groEL)
Exosomal proteins of breast cancer cells
CAR_c17970 (groEL)
Exosomal proteins of colorectal cancer cells
CAR_c17970 (groEL)
Exosomal proteins of bladder cancer cells
CAR_c17970 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEB30454
UniProt:
F4BMJ9
LinkDB
All DBs
Position
complement(1876827..1878473)
Genome browser
AA seq
548 aa
AA seq
DB search
MDEVKEKMAKDIKFSEDARASMLRGVDILADIVKVTLGPKGRNVVLEKSYGSPLITNDGV
TIAKEIELEDHFENMGAQLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPV
GIRRGIEMATRVAVEELLAISKKVDSKESIAQIAAISSGSNETGELVAEAMERVGTDGVI
TIEESKGIETELGVVEGMQFDRGYLSQYMVTDNDKMEANLENPYILITDKKISNIQEVLP
LLEQILQQGRPLLIIADDVDGEALPTLVLNKLRGTFNVVAVKAPGFGDRRKAMLEDIAIL
TGGTVITEDLGLELKDTEISQLGHASKVVVTKDATTIVEGAGSKESIEHRVALLKAQAAE
TTSEFDKEKLQERLAKLSGGVAVIKVGAATETELKERKLRIEDALNAARAAVEEGIVSGG
GTALINVQRKVSEIEATGDEATGVKIVIRALEEPVRQIVTNAGLEGSVIVEKLKSVDLGV
GYNAATDEWVDMIDAGIIDPTKVTRSALQNAASVAALLLTTEAVVANQPKPDAPMGGMGM
DPGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggtgaaggaaaaaatggcaaaagatattaaattttctgaagatgcacgtgca
tcaatgctacgcggagtagatattttagcagatattgttaaagtaacattaggacccaaa
ggaagaaatgttgttttagaaaaatcttacggctcaccacttattacaaacgatggagtt
acaatcgcaaaagaaattgaattagaagatcattttgagaatatgggagcacaacttgtt
tcagaagttgcttctaaaacaaatgatattgctggagatggtactacaacagcaactgtt
ttaactcaagctatcgttcgcgaaggattgaaaaatgtaacagctggagctaatccagtt
gggattcgccgcggaatcgaaatggcaacaagagttgctgtagaagaattgcttgctatt
tctaaaaaagtagactcaaaagaatcaattgcacaaattgctgctatttcttcaggaagc
aatgaaacaggagaattggttgcagaagcaatggaacgcgttggaacagatggcgttatt
acaattgaagaatctaaaggaatcgaaacagaattaggtgtagttgaaggaatgcaattt
gatcgtggttacctttctcaatacatggtaacagataacgataaaatggaagcaaactta
gaaaacccttatattttgattaccgataaaaaaatctcaaatattcaagaagttcttcct
ttattggaacaaattttacaacaaggacgtccattgttgatcattgctgatgatgttgat
ggagaagctcttccaacattagtattgaataaattacgtggaacatttaatgttgtagca
gttaaagctccaggatttggtgatcgtcgtaaagctatgcttgaagatattgctatctta
actggcggaacagttattactgaagatttaggtcttgaattgaaagatactgaaatcagt
caattaggacatgcaagtaaagtagttgtgacgaaagatgctactacaatcgttgaagga
gctggctcaaaagagtctattgaacaccgtgtagccttgcttaaagctcaagcagcagaa
acaacttctgaatttgataaagaaaaattacaagaacgtctagctaaactttctggcgga
gttgcagttatcaaagttggagctgctactgaaacagaattgaaagaacgtaaattacgt
attgaagatgctttaaatgcagctcgtgcagctgttgaagaaggaatcgtttctggtggt
ggaacagctttaatcaatgttcaacgtaaagtatcagaaattgaagcaacaggcgatgaa
gcaacaggtgtgaaaattgtgattcgtgctcttgaagaacctgttcgtcaaatcgtgaca
aatgccggtcttgaaggatctgtaattgttgaaaaactaaaaagcgtagacttaggcgta
ggatacaacgcagctactgatgaatgggtagacatgattgatgctgggatcattgaccca
actaaagtaactcgttcggctttgcaaaatgcagctagtgttgcagcattattgttaaca
actgaagcagttgttgcaaaccaaccaaaacctgacgctccaatgggcggaatgggaatg
gatcctggaatgggcggcatgatgtaa
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