Carnobacterium sp. 17-4: CAR_c18010
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Entry
CAR_c18010 CDS
T01452
Symbol
ydiH
Name
(GenBank) redox-sensing transcriptional repressor Rex
KO
K01926
redox-sensing transcriptional repressor
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crn03000
]
CAR_c18010 (ydiH)
Transcription factors [BR:
crn03000
]
Prokaryotic type
Helix-turn-helix
Other families
CAR_c18010 (ydiH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Put_DNA-bind_N
GFO_IDH_MocA
HTH_DeoR
vRNAP_dom_2
F420_oxidored
HTH_11
FBO_C
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AEB30458
LinkDB
All DBs
Position
complement(1880049..1880711)
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AA seq
220 aa
AA seq
DB search
MTDGGKRMVEKKIPNATARRLPIYYRYLRFLHDSGKVRVSSTELSDAIKVDSATIRRDFS
YFGALGKRGYGYDVEDLMNFFSKTLKQDRLTNVALIGVGNLGHALLNYNFHQSNNMRISA
AFDINEEIVGTILSGVPIYHMNDMVEQLKIQQIEIVIITIPSDVAQATVDSLVEANVRGI
LNFTPIRISVPDNVRVQNVDLTNELQTLIYFLDHYKPENE
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaggaaaaagaatggtagagaagaaaatacccaatgcaacggctaggcga
ttgccgatatattatcgctatttgcgattcttacatgattccggaaaagtacgtgtttct
tcaacagaattgagcgacgctattaaagtggatagtgcaacaattcgaagagacttctct
tattttggtgctttaggaaaaagaggatacggatacgatgttgaagatttaatgaatttc
tttagcaaaacacttaaacaagaccgattaaccaatgttgccttaatcggagtagggaat
ttaggacatgctttattgaattacaactttcatcaaagcaacaacatgcgaataagtgca
gcttttgatataaatgaagaaattgttggcactattttaagtggtgttcctatttatcat
atgaatgatatggttgaacaattgaaaattcaacagatagaaattgtgatcatcactatt
ccatcagatgtagcacaagcaactgtagatagtttagttgaagcaaatgtaagaggaatt
ttgaattttactcctattagaatatctgtaccagacaatgtgagagttcaaaacgttgat
ttgacaaatgaactgcaaacattgatttatttcttagatcattacaaaccagaaaatgag
taa
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