Carnobacterium sp. 17-4: CAR_c18540
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Entry
CAR_c18540 CDS
T01452
Symbol
potD
Name
(GenBank) spermidine/putrescine ABC transporter, substrate binding lipoprotein precursor
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CAR_c18540 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crn02000
]
CAR_c18540 (potD)
Transporters [BR:
crn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
CAR_c18540 (potD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AEB30511
LinkDB
All DBs
Position
complement(1934203..1935276)
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AA seq
357 aa
AA seq
DB search
MKKLLFMVLAILVVCGGLYLGADQLEKAQGITGENSLNLYNWGDYIDPELITKFEEETGY
RVTYETFDSNEAMYTKIEQGGTNYDLAVPSEYMIERMIDENLLIELDQSKIKGLNNIDAQ
FLDQPFDPDNQYSIPYFWGTLGIIYNDKFVDEDAIQHWDDLWNSSLKNKVMLIDGAREII
GLALDSEGHSLNSKDDEQLAAAAKKLDSLTPNVKAIVADEIKMYMIQEEASVAVTFSGEA
SEMLWENENLHYVIPSEGSNLWFDNFVIPKTAKNFDAAYAFINFMLEPENAAQNAEYVGY
STPNKTALELLPSEITEDEQFYPNEETMKNLEVYEDLGSEYIGIYNDYFLEFKMHRK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattactattcatggttttagccatcctagtagtttgtggaggcttgtaccta
ggtgcagatcaactagaaaaggcacaaggaattacaggagaaaatagtttgaatttgtat
aactggggagactatatcgatccagaattgatcactaaatttgaagaggaaacgggttat
agagtaacctatgaaaccttcgattctaacgaagcaatgtatacaaaaatagaacaaggt
ggaacgaattatgatttagccgttcctagtgaatacatgattgagagaatgatcgatgaa
aatttattgattgaattagatcagtcaaaaattaaaggactcaataatattgatgctcaa
tttttggatcaaccctttgatccagataatcaatactctattccttatttttggggaaca
ttaggaatcatctacaatgataaatttgtggatgaagatgccattcaacattgggatgac
ttatggaattcatctttaaaaaataaagtcatgttgattgatggagcgcgtgaaattatc
ggtttagcattagatagtgaaggacattctctaaattcaaaagatgatgaacaactagct
gctgcagctaaaaaattagatagtttgacgcctaacgtaaaagctattgttgcggacgaa
atcaaaatgtatatgattcaagaagaagcttcagtagccgttactttttctggtgaggca
tctgaaatgttatgggaaaacgaaaatctccattacgtcattccaagcgaaggctcaaat
ttatggtttgacaattttgtcattccaaagacagctaaaaactttgatgcagcgtatgca
tttatcaacttcatgttagaaccagaaaatgcagcgcaaaatgccgagtacgtaggctac
tcaacgcctaataaaacagcattagaactcttaccatctgaaataacagaagatgaacaa
ttttacccaaatgaagaaactatgaaaaacctagaagtttacgaagacttaggttccgaa
tacatcggcatctacaatgactacttcctagaattcaaaatgcacagaaaataa
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