Carnobacterium sp. 17-4: CAR_c18720
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Entry
CAR_c18720 CDS
T01452
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CAR_c18720 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crn03400
]
CAR_c18720 (ung)
Enzymes [BR:
crn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CAR_c18720 (ung)
DNA repair and recombination proteins [BR:
crn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CAR_c18720 (ung)
Prokaryotic type
CAR_c18720 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEB30529
UniProt:
F4BMY3
LinkDB
All DBs
Position
complement(1953666..1954349)
Genome browser
AA seq
227 aa
AA seq
DB search
MTVPVNNSWLPILQEQTNTPSYHLLKEFLVQEYQETIVYPEMHHIWQAFEWTPYNEVKVV
ILGQDPYHGPKQAHGLSFSVLPTVKIPPSLVNIYKELQSDLGISPVDHGYLESWAKQGVL
LLNTVLTVRKGQAHSHKGKGWETLTDAVIKKLSDRNQPMVFILWGNPSIKKRALIDESKH
VVLTSVHPSPLSAYRGFFGSKPFSKANDALIKFGEEPINWQLPESVQ
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ttgactgtacccgtaaataatagttggctgccaattctacaagaacaaacaaacacccca
tcttaccatttactgaaagaatttcttgtacaagaataccaagaaacaatcgtttatcca
gagatgcatcacatttggcaagcttttgaatggacaccttataatgaagtgaaagtggtt
attttaggacaagatccttatcacggaccaaaacaagctcatgggttaagcttttctgtg
ttgccaaccgtgaaaattcctccctcattagttaatatctataaagagttacaaagtgat
ttaggaatctcacctgtagatcatggttatttagaatcatgggctaaacaaggtgtgcta
ttactaaataccgtattaacggtgcgtaaaggacaagctcattcacataaaggaaaagga
tgggaaacactaaccgatgctgttataaagaaattaagtgaccgtaatcagccaatggta
tttattctatggggcaacccttcgataaaaaagagagcattgattgatgaatcaaaacac
gttgtgttgacctcagttcatccaagtcctttatccgcttaccgtggttttttcggatcg
aagccattttctaaagcaaatgatgcattgatcaaattcggtgaagagccgataaactgg
cagttgcctgaatctgttcaataa
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