Carnobacterium sp. 17-4: CAR_c19030
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Entry
CAR_c19030 CDS
T01452
Symbol
sbcC
Name
(GenBank) DNA ATP-dependent repair enzyme
KO
K03546
DNA repair protein SbcC/Rad50
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crn03400
]
CAR_c19030 (sbcC)
DNA repair and recombination proteins [BR:
crn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CAR_c19030 (sbcC)
Archaeal homologous recombinant proteins
CAR_c19030 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_16
AAA_21
ABC_tran
WYL_3
Motif
Other DBs
NCBI-ProteinID:
AEB30560
UniProt:
F4BN91
LinkDB
All DBs
Position
complement(1987653..1990712)
Genome browser
AA seq
1019 aa
AA seq
DB search
MRPLKLVMNAFGPYKEKVVIDFTQFHQQTLFLVSGPTGAGKTTIFDAIAYALYDDASGTS
RGKDSFKSQFATDEVLCFVELEFEITGKKYFIKRSPVQKGPGKNGKLKNWSSEVEFHHNG
TVTTKINEANKEIQELLSLSYEQFKQIVMLPQGEFKKMLESNSADKEKIFRNIFQTDMIK
EFQSILKEKASDLKQEINQSESTLQQFVGMIPEHSNDILNEAVAYFDIPTIIKELGHVVE
SYQKNIVDIEKELATLDGKYHSNQRKIDLLTVVDSLEKEKNLLDDSKEMIETKRVNLELA
KKAEDCLEVKRQLERIVNEKEGIEKEQYAEQLKLAKTVDQLDETEKNYVALQTAYNELPN
RREALNNLKEQEKLLSERSTKYDVQANLEEENEQHLQSVQFLKIQVDTVEEQLKEQELEL
KEIQQAKINMLEKQRETSSLQQRQYETKKQQESLNELSMFLEKQAVKASEFQEIENQFTQ
IERQYQEQRLVYNRNIAGVLANELEENKACPVCGSLHHPSPALVASDTISKEMLEELEIQ
KNEAGMKFDRISIELQGLNKAIHSGEKSLDIQKSDVQDERNKIECQVSNENKQQQQLIVE
LADLQKRINTEGKIEKNKQEKVLQIKEKESTIQELQSSVQYNKKRIDELKIEIDLLNTTV
TETDLSVLQKQIEEKTNEITHIEKDYVEAQEKKVQLERLLTQYQTSTKSFEKQVKALLER
ESEMGGKLKQQLAVNHLEDTFESYLLKQETKQQWGEEIESFDKKKWTNQANILEQKKLLE
KEGTTQSYEVYALDNQEIERESRTLKEQQHEQIGTNKTVQSILSQIQLNHHAKKDQQEEY
LMYKELAEMANGSKETDYISFERYVLGIYFEEIIEAANTRFTQMTTNRYSLIRNKEKTKG
AGPKGLDLDVFDNYTGMKRSVKTLSGGESFKASLALALGLSDVIQNHSGGVSVDTLFIDE
GFGTLDVDSLDSAIETLFELNQRGRLVGIISHVEELKTRIPVHIEVTKSSRGSHATIKV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgagaccattaaaattagttatgaatgcttttgggccttataaagaaaaagttgtgatt
gattttactcaatttcaccaacaaacattattcttagtaagtggtcctactggggcaggg
aaaaccacgatattcgatgctatcgcttacgctctatatgatgatgcaagtggaacaagt
cgtggaaaagattcttttaaatcacaatttgctactgatgaagtgctctgtttcgtagag
ttagaatttgaaataacgggtaaaaaatattttattaaaagaagcccagtacaaaaggga
ccaggtaaaaatggaaagttgaaaaattggtcttcagaagtagaatttcatcataacggt
acagttacaactaaaattaatgaagcaaacaaagaaattcaggaattgctttcattatcg
tatgaacaattcaagcagattgttatgcttcctcaaggcgaatttaaaaaaatgttggaa
tctaacagcgcggataaggaaaagatttttcggaatattttccaaacagatatgatcaaa
gaatttcaatcgatcttaaaagaaaaggccagcgatctaaaacaagaaataaaccaaagt
gagagtaccttacaacaatttgtcggaatgatacctgagcactctaatgatatcttaaat
gaagctgttgcatatttcgatataccaactattataaaagaattgggtcatgtagttgag
agttatcaaaaaaatattgtggacattgaaaaagaactcgcaactttagatgggaaatat
catagcaatcaacggaaaatagatttgttaactgttgtagattctttagaaaaagaaaag
aacttgttggacgacagtaaagaaatgattgaaaccaaacgtgtaaatttagagcttgct
aaaaaagcagaagattgtttggaagtaaaacggcaattagaaagaatcgttaacgaaaaa
gagggcattgaaaaagaacaatacgcagaacaactgaagttagctaaaacagtagatcaa
ttagatgaaacagaaaaaaattatgttgctttacaaacggcttataatgaattgccaaat
aggcgagaagctttaaacaatttgaaagaacaagaaaagttactgagtgagcgatcaact
aagtacgatgtgcaagctaacttagaggaagaaaatgagcaacacttacagtcggttcaa
tttctaaaaatccaagttgacacagtggaagaacaactaaaagaacaagaacttgaactg
aaagaaatccaacaggcaaaaataaatatgttggagaaacagcgcgaaacaagtagttta
cagcaaagacaatacgaaactaaaaaacagcaagagtctttaaatgagctaagtatgttt
ttagaaaaacaagctgttaaagctagtgaatttcaagaaatagaaaaccaatttactcaa
atagaaagacaataccaagaacaacggttggtttataatcgaaatatcgctggtgttcta
gctaatgaattagaagagaataaagcatgtcctgtttgcggatcgcttcatcatccttct
ccggcacttgtggcatcagacacgatttcaaaagaaatgctggaagagttagaaatacaa
aaaaatgaagcaggtatgaagtttgatcgaatctctattgagttacaaggattaaataaa
gctattcactctggtgaaaaaagcttagatattcaaaaaagcgacgtacaagatgaacga
aataaaattgagtgccaagtatccaatgaaaataagcaacaacagcaattaatagtagag
ttagctgatttgcaaaagaggataaatacagaaggaaaaattgagaagaataaacaagaa
aaagtacttcaaataaaagaaaaagaatcaaccattcaagaacttcaatcttcagttcaa
tacaataaaaagcggattgatgaattgaaaatagaaattgatttgttaaatacaactgta
acagaaacggatctatcggttctgcaaaaacaaattgaagaaaaaacaaatgagatcaca
catattgaaaaagactacgtcgaagctcaagaaaagaaagttcaactagaaagattgttg
acccagtaccagacaagtacgaaatcttttgaaaaacaagtgaaggcattacttgaacga
gagtctgagatgggagggaaattgaagcaacaattagcagtaaaccacttagaagatact
ttcgaaagctatttattgaaacaagaaactaagcagcaatggggagaagaaatagaatcg
tttgataagaaaaaatggacgaatcaagcgaatatcttggaacaaaaaaagctgcttgaa
aaagaaggcaccactcaatcctatgaagtatatgcattggataatcaagaaattgaacgt
gaaagcaggacgttgaaagaacaacagcatgaacagattggaacgaacaaaaccgtacaa
tctattctttctcaaattcaactgaaccatcatgcaaaaaaggatcaacaagaagaatat
ctaatgtacaaagagctagctgaaatggctaatggatcaaaagaaacagattatatttca
ttcgagcggtatgttttggggatttattttgaagaaatcattgaagcagcgaacacacga
ttcactcaaatgactactaatcgttattcgctcatccgtaataaagaaaaaacaaaaggt
gcaggtcctaaaggattggatctagatgtatttgataattacactggcatgaaaagaagt
gttaaaaccttatcgggtggagaaagttttaaagcatctttagcactagccttaggttta
agtgatgtgattcaaaatcatagtggaggagtcagtgtagacactttattcattgatgaa
ggttttggtacactagatgtggattcattggacagtgcaattgaaacattatttgaatta
aatcaacgcggtcgattagtagggattatttcccatgttgaagagttgaaaacgagaata
ccagtccatattgaagtaacaaaatcttctagaggaagtcacgctaccataaaagtatag
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