Carnobacterium sp. 17-4: CAR_c19040
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Entry
CAR_c19040 CDS
T01452
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crn03400
]
CAR_c19040 (sbcD)
DNA repair and recombination proteins [BR:
crn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CAR_c19040 (sbcD)
Archaeal homologous recombinant proteins
CAR_c19040 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AEB30561
UniProt:
F4BN92
LinkDB
All DBs
Position
complement(1990714..1991844)
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AA seq
376 aa
AA seq
DB search
MRLLHTADWHIGKIVNEMSMLEDQEYFLDQLIKKLKTIQVDALIMAGDLYDRAMPSKEAV
ALANKVLTRLIQEVDLPILVIAGNHDSNERVEYGADLLATNQLYIEGTVKEVTRKVTLKG
VNFYLLPFADYAYIRELLQDESIKSLEDATRVQIEAIKKEMDPSEINVLIAHGYVINLTN
DTSETTDSERPLSIGTAEYVSVELFEDFDYVALGHLHKAQKVKHDRIRYSGSILKYSKSE
AVHKKQVSLVTLEKNHVEIEPIYIESKRDMRVLKGFFATLMEQHSDDYVFFELLDENFVM
DAMNQLRRRYPNAMGLEYAARKEREENASTMHQEHLKKLSVQDIFDDFYAHYKEKDLTVE
HKSIINNILHEMERGE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcgattattacatacagcagactggcatattgggaaaattgtcaatgaaatgtcgatg
ttagaagatcaagaatattttcttgatcaattaattaaaaaattaaaaacaatacaggtt
gacgctttaattatggcgggagatttatatgaccgtgcgatgccttcaaaagaagcagta
gccttagctaataaagtattaacaagactgattcaagaagttgatcttcctattttggtc
atagcaggcaaccatgatagcaatgaaagagtagaatatggagcagatcttttagcaacc
aaccagctctatattgaaggaacggtcaaagaggtgacaagaaaagtaactcttaaagga
gttaacttttatttactaccttttgcagactatgcttatattagagagctgctgcaagac
gagtcaatcaaaagtctagaagacgctacaagggttcaaatagaagccatcaaaaaagaa
atggatccttcagaaataaacgttttgatagcacatggatatgtcattaatttaaccaat
gatacttctgaaacgactgattcagaaagaccgttaagtattggaacggccgaatacgta
agcgtggagctgtttgaagattttgattatgtagcgttgggtcatttgcataaggctcaa
aaagtaaagcacgatcgtattcgttacagcggatcaatattaaaatattcgaaatcagaa
gcggtgcataaaaaacaagtatccctagtaacgttagaaaaaaatcatgttgagattgaa
ccgatctacatcgaatctaaacgagatatgcgtgtcctcaaaggtttctttgctacatta
atggaacaacattcagacgattatgtattttttgaattgctggatgaaaattttgttatg
gatgcaatgaatcaactgcgtcgtcgttatccaaatgctatgggcttggagtatgcggct
cgaaaagaacgtgaagaaaacgcatcaactatgcatcaggaacacttgaaaaaattatca
gtccaagatatttttgatgatttctatgcacattacaaagaaaaagatttaactgttgaa
cacaaaagtatcattaacaacattttgcatgaaatggagagaggtgagtag
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