Carnobacterium sp. 17-4: CAR_c20990
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Entry
CAR_c20990 CDS
T01452
Name
(GenBank) ABC transporter
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CAR_c20990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crn02000
]
CAR_c20990
Transporters [BR:
crn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CAR_c20990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
Rad17
nSTAND_NTPase5
AAA_5
AAA
T2SSE
AAA_16
AAA_30
AAA_25
NB-ARC
AAA_22
bpMoxR
AAA_19
RsgA_GTPase
TsaE
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
AEB30756
LinkDB
All DBs
Position
complement(2194687..2195727)
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AA seq
346 aa
AA seq
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MSFVDLENIRVSYDGKNNILKELNLSMEKGELISLLGPSGCGKTTTLRVIAGLIEPNDGT
FTVGDTNLTKVPVHKRNFGMVFQSYALFPHLTVKENIGFGLKLRKEKKEVIETKVQAILE
STDLSDYAERYPKQLSGGQRQRVALARALVIEPQLLLLDEPLSNLDAKLRISMRIEIKRI
QRRLGITTVFVTHDQEECFSISDKVAVMNNGVIEQYDSPEEIYKNPKTEFVARFIGFENF
FALTKQDTHTYTTSDGTLIETMHPADRQQATGTIRPDDILLSANEQVVPSNSLAGTIRVR
TFLGKSYQYEVETAIGKLLVNDVRVPGYQVGDDVFVVIPKEKLILV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgttgacttagaaaatattcgtgttagttatgatggaaaaaataatatatta
aaagaactcaatttatctatggaaaaaggggaactgatttcgttactaggaccatcaggt
tgtgggaaaacaacgactttacgggtcattgcaggcctgattgagcctaatgatggaacc
tttactgtaggagataccaatttgacaaaagttcctgtccacaaacgtaattttggaatg
gtttttcaaagttatgcgttatttccacatttaactgttaaagaaaatattggttttggg
ttgaagttgaggaaagaaaaaaaagaggtcattgaaactaaagtgcaggctattttagaa
tctactgacttatcagattatgctgaacgttatcctaagcaactttctggagggcagcgt
caacgtgtagctcttgctagggctttagtgattgaacctcaattattgttactagacgaa
cctttgagtaatttggatgctaaattgcgcattagtatgcgtattgagattaaacgcatt
caacgcagattaggtataacgacggtttttgtaacacatgatcaagaagaatgtttttcg
atttcagataaagtagccgttatgaacaacggagtaattgaacagtatgattctccggaa
gaaatttataaaaatcctaaaaccgaatttgtagctcgcttcattggatttgaaaatttc
tttgctttaaccaaacaagatacacatacttacacaacttcggatggaacgttaattgaa
acaatgcatccagcagatagacaacaagcaacaggaacgattcgtccagatgatatttta
ctttctgcgaatgaacaagttgtaccgtctaatagtctagctggcactataagagttcgt
acgtttttaggcaagagttatcaatatgaagtagaaacagctattggaaaactattagtt
aatgatgtgcgagtacccggttaccaagtaggcgatgacgtttttgtcgtcattccaaaa
gaaaaattgattttagtttaa
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