Carnobacterium sp. 17-4: CAR_c21960
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Entry
CAR_c21960 CDS
T01452
Symbol
lytS
Name
(GenBank) two-component sensor histidine kinase
KO
K07704
two-component system, LytTR family, sensor histidine kinase LytS [EC:
2.7.13.3
]
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CAR_c21960 (lytS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
crn01001
]
CAR_c21960 (lytS)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
crn02022
]
CAR_c21960 (lytS)
Enzymes [BR:
crn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
CAR_c21960 (lytS)
Protein kinases [BR:
crn01001
]
Histidine kinases
LytTR family [OT]
CAR_c21960 (lytS)
Two-component system [BR:
crn02022
]
LytTR family
LysS-LysR
CAR_c21960 (lytS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5TM-5TMR_LYT
His_kinase
HATPase_c
GAF_3
GAF_2
GAF
HATPase_c_3
P1
Motif
Other DBs
NCBI-ProteinID:
AEB30853
UniProt:
F4BPS3
LinkDB
All DBs
Position
complement(2312560..2314308)
Genome browser
AA seq
582 aa
AA seq
DB search
MFNLFILMLERGGLIIILAYILMNIPYFKNLLGNRRKLSTMVQLIIVFGIFAIISNFTGI
EIRGNQIMIDQPFSDLSPHSSLANTRVLTIGVAGLIGGPIIGVSVGIVSGAIRYLQGGMD
AYIYVISSILVGLFSGLYGLKSIRKNTYPKVGEGLAIGAAMEALQMVSIIFLSTRFQESI
DLVQFIMLPMILTNSIGTGIFLSIIDSTLRQEEQTRAVQTHDVLQLANETMPYFRSGMSE
ESCTQAAKIIQKLIKVSAVSITNKDSILAHVGAASDHHFPSKKIVTSLSKEVLRTGEIKE
AHSYHEIGCVHPDCPLEAAIVIPLKSKNKTVGTLKMYFTDASKLTFVERQLAEGLATIFS
SQIELGEMELQSQLLQDAEIKSLQAQVNPHFFFNTINTISALIRVDSEKAREMLLQLSTF
FRSNLQGARTNVIPLEKELLQVEAYMKLEQARFPDRYQVEMNIEKGRKNILLPPFVIQIL
VENAFKHAFKNRKVGNLVHVTVNKVDQDILISVQDNGYGIDRDRLKKLGKVSVPSEQGTG
SALENLNKRLISLFGDRAQLNIKSSEQGTIVMCRIPYQGVEG
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacttatttattttaatgcttgaacgtggcggattaattattattttggcatat
atattaatgaatatcccttattttaaaaaccttttaggaaatcgaagaaaactaagtacg
atggttcagctgattatagtattcggaatatttgctattatttctaactttactgggata
gaaattcgtggcaatcaaattatgattgatcaaccgttttctgatttatcacctcattct
tctttagcgaatacccgtgtattaacgattggtgttgcaggtttgataggagggccgatt
ataggtgtgagtgtgggtattgtttcaggtgctatacgctatctccaaggcggaatggac
gcttatatctatgtgatttcttcaattttagttggcttattttccggattatatgggttg
aaatctattcgaaaaaatacttatccaaaagttggtgagggacttgccattggtgcagca
atggaagcccttcaaatggtcagtatcatttttctaagtacacgatttcaagagtcaata
gacctagtgcagtttattatgttgccaatgatattgacgaatagtattggaacgggaatt
ttcttatcgattattgactcaacactgaggcaggaagaacagacaagagcagtccaaacg
catgatgttttgcaattggctaatgaaacaatgccttattttcgttctggtatgagtgag
gaatcttgtacgcaagcagcaaaaattattcaaaaactgatcaaagtttcagccgttagt
attaccaacaaagacagtattttggcacatgttggtgcagccagtgatcatcattttcct
tcgaagaaaatagtaactagcttatctaaagaagttttgcgaactggagaaatcaaagaa
gcacattcttatcatgaaattggatgcgttcatcctgactgtccattagaagcagcaatc
gttattccgttgaaatcaaagaacaaaacggttggaacgttaaagatgtacttcactgat
gcctcaaaacttacctttgttgaaagacaattagctgaaggtctggcaactatattttcc
agccaaattgaacttggagaaatggaattgcaaagccagctcttacaagatgcagaaatt
aaatcgttacaagctcaagtaaatccgcactttttctttaataccatcaataccatttct
gcactgattcgagtggatagtgagaaagctcgtgaaatgctactacagctcagtactttt
tttagatctaatttacaaggtgccagaacgaatgtgattcctttagaaaaagaactcctt
caagtggaggcgtatatgaaattggaacaggcacgttttccagatcgctaccaagtggaa
atgaatatagaaaaaggtcggaagaacattttattacctccattcgtgattcagatatta
gtagaaaacgccttcaaacatgcatttaaaaatcggaaagtgggtaacctagtccatgtg
acggttaataaagtggatcaagatatccttataagtgtacaagataatggatatggaata
gatagggatagacttaagaaattaggtaaagtaagtgtcccctccgaacaagggaccggt
tcagctttggaaaatttgaataaacggttgattagtttatttggtgatagagctcaatta
aatatcaaatcttcagaacaaggaaccattgtaatgtgtagaataccttatcaaggagtg
gagggataa
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