Carnobacterium sp. 17-4: CAR_c25100
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Entry
CAR_c25100 CDS
T01452
Name
(GenBank) transcriptional regulator, GntR family protein
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crn03000
]
CAR_c25100
Transcription factors [BR:
crn03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CAR_c25100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
HTH_DeoR
HTH_41
HTH_36
TrmB
HTH_Crp_2
DnaD_N
SAMD1_WH
Rrf2
MCM5_C
Motif
Other DBs
NCBI-ProteinID:
AEB31161
UniProt:
F4BRK0
LinkDB
All DBs
Position
2622876..2623592
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AA seq
238 aa
AA seq
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MSKFNEIFLDLEAAILNQRFISGDLLPSENELVKTYNVSRETIRKALNLLLEKGYIQKIQ
GKGSIVLDIKRFDFPVSGLTSYKELQDAQNMNSQTIVVSNNLLPVSEELANHLNLSVGTP
VLYLERLRKVHGEVVIIDKDYLLTSIIPSIPNEAAEDSLYHYIEQTLGLSIGYAQKEITV
DPITEEDKRLMNLQEDTHVVVVRSDVYLEDTTLFQHTESRHRLDRFRFVDFARRRNSL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtttaatgaaatttttttagatcttgaagcagctattttaaatcagcgattt
atttcaggcgatcttttacctagtgaaaatgaattagtcaaaacctacaatgtttcccgt
gaaacaattcgaaaagctctaaatttacttctagaaaaagggtatatacaaaaaatacaa
ggcaaaggctctattgttttagatattaaacgcttcgattttcctgtatcagggttgacc
agttacaaagaactccaagatgcacaaaatatgaatagtcaaacaattgtggtatcaaat
aacttactacctgtttcagaagagttagcaaatcacttaaatctttctgtaggtactcct
gttttgtatcttgaacgattaagaaaagtacatggagaagtggttatcattgataaggat
tatttattaacttctattattccaagtatcccgaatgaagcagctgaagattcgttgtac
cattatattgaacaaacattgggtttgtctatcgggtatgctcaaaaagaaataacggta
gatcctattaccgaagaagataagcgattgatgaatttacaagaagatacccatgttgta
gttgtgcgaagcgatgtctacttagaagatacaaccctatttcagcataccgaatctcgt
catcgtttggatcgctttcgatttgtcgattttgctagacgccgaaattctctttag
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