Citrobacter rodentium: ROD_00941
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Entry
ROD_00941 CDS
T01145
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cro
Citrobacter rodentium
Pathway
cro00470
D-Amino acid metabolism
cro00550
Peptidoglycan biosynthesis
cro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ROD_00941 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ROD_00941 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
ROD_00941 (murD)
Enzymes [BR:
cro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ROD_00941 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
Precursor biosynthesis
Amino acid ligase
ROD_00941 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
CBG86874
UniProt:
D2TGE5
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All DBs
Position
112844..114160
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AA seq
438 aa
AA seq
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MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRATPPGLDKLPEAVERHIGSLNE
DWLLAADLIVASPGIALAHPVLSAAADAGVEIVGDIELFCREAQAPIVAITGSNGKSTVT
TLVGEMAKAAGVNVGVGGNIGLPALMLLDAGRELYVLELSSFQLETTYSLQAEAATILNV
TEDHMDRYPFGLQQYRAAKLRVYENASVCVVNADDALTMPVRGADARCVSFGVNMGDYHL
NRQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGL
AHRFQLALEHNGVRWINDSKATNVGSTEAALNGLQVDGTLHLLLGGDGKSADFSPLGRYL
TGDRVRLYCFGRDGAQLAALRPEIAEQTQTMEEAMRLIAPRVKPGDMVLLSPACASLDQF
KNFEQRGDLFTRLAKELG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcagattaccagggtaaaaacgtcgttattatcggtctggggttaaccggactctct
tgcgtggactttttcctggcccgcggcgtgactccccgggtgatggatactcgcgcaacg
ccgccggggctggataagttaccggaagcggttgaacgacacattggtagtctgaatgaa
gactggctgctggcggcggatctgatcgtcgccagtcccggtatcgccctggcgcatccg
gtgctcagcgccgccgctgacgcgggcgtggagattgtcggcgatatcgaactgttctgc
cgcgaagcgcaggcaccgatcgtggcgattaccggctcgaacggcaaaagcaccgtcacc
accctggttggcgaaatggcgaaggcggcgggcgttaacgtgggcgttggcggcaatatc
ggccttcccgccttaatgctgctggatgccgggcgtgaactgtacgttctggaactgtcc
agcttccagctggaaaccacttacagcctgcaggcggaggcggcgacgatcctcaacgtt
actgaagatcatatggaccgctatccgtttggcctgcagcagtatcgtgcggcaaaactg
cgcgtctatgaaaacgccagcgtctgcgtggttaacgccgatgacgcgctgacgatgccg
gtgcgcggcgccgacgcgcgctgcgtcagcttcggcgtcaacatgggcgactatcacctc
aaccgccagcagggcgaaacctggctgcgggtgaaaggtgaaaaggtgctgaacgtgaaa
gagatgaagctcagcggtcagcacaactataccaacgctctggcggcgctggcgctggcg
gacgcggccggtttaccgcgagccagcagcctgaaagcgctgaccacgttcaccggcctg
gcgcatcgcttccagctggcgctggagcataacggggtgcgctggattaacgattcgaag
gccactaacgtcggtagtaccgaggccgcgctcaacggtttacaggttgacggcaccctg
catctgctgcttggcggcgatggcaaatcggcggatttctcgccgcttggccgctatctg
accggcgatcgcgtgcgtctgtactgcttcgggcgcgacggcgcgcagctggctgcgctg
cggccggagatcgctgagcagacgcagaccatggaggaggcaatgcgtctgattgcgccg
cgcgtgaagccgggcgatatggtgctgctctctccggcctgcgccagcctcgatcagttt
aagaattttgagcaacggggcgatctctttacccgtctggcgaaggagttaggttga
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