Citrobacter rodentium: ROD_00981
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Entry
ROD_00981 CDS
T01145
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cro
Citrobacter rodentium
Pathway
cro00470
D-Amino acid metabolism
cro00550
Peptidoglycan biosynthesis
cro01100
Metabolic pathways
cro01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ROD_00981 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ROD_00981 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ROD_00981 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
ROD_00981 (ddlB)
Enzymes [BR:
cro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
ROD_00981 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
Precursor biosynthesis
Amino acid ligase
ROD_00981 (ddlB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
CBG86878
UniProt:
D2TGM9
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All DBs
Position
117994..118914
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AA seq
306 aa
AA seq
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MADKIAVLFGGTSAEREVSLNSGAAVLAGLREGGVDAHPVDPKEVDVTQLKAMGFQKVFI
ALHGRGGEDGTLQGLLELIGLPYTGSGVMASAISMDKLRSKLLWQGAGLPVAPWVALTRA
QFEKGLSEELVTQISALGLPLIVKPSREGSSVGMSKVAEYDALQSALALAFQHDEEVLIE
KWLSGPEFTVAILGEEILPTIRIQPAGTFYDYEAKYLSDETQYFCPAGLETAQEALLRDL
VRKAWSTLGCKGWGRIDAMLDSDGQFYLLEANTSPGMTSHSLVPMAAREKGLSFSQLVVR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaatcgcggtcctgttcggcgggacttccgctgagcgcgaggtgtcgctg
aactccggcgcggcggtgctggccggtttacgtgaaggcggcgtggatgcgcatcctgtc
gacccgaaagaggtggacgtcacgcagctgaaagccatggggtttcagaaggtctttatc
gcgctgcacgggcgcggcggcgaagacggcaccctgcaggggctgctggagctgatcggc
ctgccctataccggcagcggcgtgatggcgtctgccatctcaatggataaactgcgcagc
aaactgctgtggcagggcgctggcttacccgttgcgccgtgggtggcattaacccgtgcg
caatttgaaaaagggcttagcgaagagctggttacgcaaatttccgcgcttggtttaccg
ttaatcgttaagcccagccgcgaaggttccagcgtggggatgtcgaaagtggcggaatat
gacgctttacaaagcgcattagcgctggcatttcagcacgatgaagaagtactgattgaa
aaatggctcagcggaccggaatttaccgtcgcgatactcggtgaagaaattttaccgaca
atccgtatccaacccgccggaaccttctatgattatgaggcgaagtatctctctgatgag
actcagtatttctgccccgccggtctggaaaccgcgcaagaggcgcttttacgtgattta
gtgcgaaaagcatggtccacgctgggctgtaaaggctgggggcgtattgacgccatgctt
gatagcgacggtcagttttatctgctggaagcgaatacctcaccgggtatgaccagccac
agcctggtgccgatggcggcgcgtgagaaagggctgagcttctcgcagctggtggtacgc
attctggaactggcggactga
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