KEGG   Citrobacter rodentium: ROD_01111
Entry
ROD_01111         CDS       T01145                                 
Symbol
hofB
Name
(GenBank) protein transport protein HofB
  KO
K02504  protein transport protein HofB
Organism
cro  Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:cro00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cro02044]
    ROD_01111 (hofB)
Secretion system [BR:cro02044]
 Type II secretion system
  Type IVa pilus homolog protein
   ROD_01111 (hofB)
SSDB
Motif
Pfam: T2SSE MshEN AAA_16 AAA_30 AAA_11 AAA_22 AAA_7 AAA_14 DEAD AAA_29 ResIII nSTAND3 Sigma54_activ_2 AAA_19 AAA_23 PELOTA_1 Adeno_IVa2
Other DBs
NCBI-ProteinID: CBG86891
UniProt: D2TGP2
LinkDB
Position
complement(131545..132930)
AA seq 461 aa
MNTTQLKALCQRYQGILLDADSEAVHVAVVDAPSHQLLDALHFATTKRIEIVCWTRQQME
GHLHQPQQTLPAVIPESSLSAATLLDKTLQAALTSRASDIHIEPAEHHFRIRLRIDGVLH
SLPDIAKETGVALTARLKVLSHLDIAEHRLPQDGQFTVELNGAAVSFRIATLPCRQGEKV
VLRLLHQVNQALEVTALGMHDTQLSAFNHALQQPQGLVLVTGPTGSGKTVTLYSALQSRN
ATEVNLCSVEDPVEIPLEGINQTQIHPRAGLTFQSVLRALLRQDPDVIMVGEIRDGETAE
IAIKAAQTGHLVLSTLHTNSTCEALVRLQQMGVARWMLSSALTLVVAQRLVRKLCPHCRR
LTDDPVRLPQAVCAMPLPRWLAPGCEHCYHGYYGRTALFEVLPISAGLRQQIANGATAEA
LEGYARQAGMLTLFESGCRAVDQGLTTFEELVRILGIPNER
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgaataccacgcagctaaaagcgctttgccagcgctatcaggggatcctgcttgacgcc
gatagcgaagccgtacacgtcgccgtagtggacgcgccttcccatcagctactggatgcc
ctgcacttcgccaccaccaaacgcattgaaattgtctgctggacgcgtcagcaaatggag
ggacatctgcaccagccgcagcaaacgctgcccgcggtgatacctgaatccagcctcagc
gcggcgacgctacttgataaaacgttacaggcagcgctgaccagccgcgcctcagatatc
cacattgagcctgcggaacatcactttcgcattcgcctgcggatagatggcgtgctgcat
agcctgcccgatattgcgaaagagacgggcgtcgccctgacggcgcggctgaaggtcctg
agccatctggacattgccgagcaccggctgccgcaggatggtcagttcaccgtcgaactg
aacggcgccgccgtctcgtttcgtattgccacgctcccgtgccgccagggtgaaaaggtg
gtgctgcgtctgctgcatcaggtgaaccaggcgctggaggttaccgcgctgggaatgcac
gacacgcagctttccgcctttaaccatgcgttacagcagccgcaggggctggtgctggtc
accggccccacgggcagcggcaaaacggtgacgctgtacagcgcactgcagtcgcgaaac
gcgacggaggtaaacctgtgcagcgttgaagatccggtggagataccgctggagggtatt
aaccagacgcagatccatccgcgcgccggactgacctttcagagcgtattacgggcgctg
ttacgccaggacccggatgtcattatggtcggtgagatccgcgacggcgaaacggcggaa
atcgccattaaagcggcgcaaaccggtcacctggtgctttccacgctgcatactaactcc
acctgcgaagcgctggtgcgcctgcagcagatgggcgtggcgcgctggatgctctcatcg
gcgctaacgctggtagtggcgcagcgtctggtaagaaaattgtgcccccactgtcgccgc
ctcacagacgatcctgtccgtttgccgcaagccgtgtgcgccatgcccctgccccgctgg
ctggcgccgggctgtgagcattgttatcacggctattatggccgcacggcgctgtttgaa
gtgctgccgataagcgccgggctgcgccagcagattgcgaacggcgccacggcagaagct
ctggaagggtatgccagacaggcagggatgctcacgctgtttgaaagcggctgccgcgcc
gttgaccagggactgacgacatttgaggagctggtacgcatcctgggtatccccaatgag
cgctaa

DBGET integrated database retrieval system