Citrobacter rodentium: ROD_01941
Help
Entry
ROD_01941 CDS
T01145
Symbol
ldcC
Name
(GenBank) lysine decarboxylase, constitutive
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
cro
Citrobacter rodentium
Pathway
cro00310
Lysine degradation
cro01100
Metabolic pathways
cro01110
Biosynthesis of secondary metabolites
cro01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
ROD_01941 (ldcC)
Enzymes [BR:
cro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
ROD_01941 (ldcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF6348
PKcGMP_CC
Motif
Other DBs
NCBI-ProteinID:
CBG86973
UniProt:
D2TI76
LinkDB
All DBs
Position
229624..231762
Genome browser
AA seq
712 aa
AA seq
DB search
MNIIAIMGPHGVFYKDEPIKELERALQAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVHDMRMALWFFEYALGQAEDIATRIRQY
TDEYLDNITPPFTKALFTYVKEGKYTFCTPGHMAGTAYQKSPPGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPTGSTLLI
DRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPRREFTRESIENKVAETPQAQWPVH
AVITNSTYDGLLYNTNWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIF
ETQSTHKMLAALSQASLIHIKGEYDEDTFNEAFMMHTSTSPSYPIVASIETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDSWFFDIWQPEEVDAAECWPVAPGEEWYGFNDAD
HDHMFLDPVKVTILTPGMDEQGNMSDEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQH
DLPGLMLRAFDTLPEMMMTPHQAWQRQIRGDVETVTLDQLVGRVSANMILPYPPGVPLLM
PGEMITEQSRAVLDFLLMLCSVGHHYPGFETDIHGAKQDEEGVYRVRVLKNI
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcattgccattatgggaccccatggcgtcttttataaagatgaacccattaag
gagcttgagcgcgcactgcaggcgcaagggtttcagattatctggccgcaaaacagcgtc
gatctgctgaagtttattgaacacaacccgcgaatctgcggcgtgatttttgactgggat
gagtacagtctcgatctttgcagcgacattaatcagctcaacgaatatttgccgctgtac
gcctttattaatacccattccacgatggacgtcagcgtacacgatatgcgcatggcgcta
tggttctttgagtatgcgctggggcaggcggaagatatcgccacgcgcatccggcagtac
actgacgaatacctcgacaacattacgccgccctttaccaaagcgttattcacctatgtg
aaggaagggaagtataccttctgtacgccgggacatatggccggcaccgcatatcaaaaa
agtccgccaggctgcctgttttatgacttttttggcggcaacacgctgaaagccgacgtt
tcgatttcggtcaccgaactcggttcgttgctcgaccataccggcccgcatctggaggcg
gaagagtacattgcccgaaccttcggcgcagagcagagctatatggtgactaacggcacc
tctacgtccaataagattgtcgggatgtatgccgcaccgaccggcagtacgctactgatt
gatcgcaactgccataaatcgctggcgcatctgctgatgatgagcgatgtcgtccccctg
tggctgaaaccgacgcgcaatgcgcttggcatcctcggcggcattccgcgacgcgaattc
acgcgcgagagcatagaaaataaggtcgccgaaacgccgcaggcgcagtggccggttcat
gcggttatcaccaactccacctatgacgggctgctgtataacaccaactggattaagcag
acgctggatgtcccgtcgatccacttcgattccgcctgggtgccgtacactcattttcat
cccatctatcagggaaaaagcggcatgagcggcgagcgggtgccgggtaaagtgatcttc
gagacgcagtcgacccataagatgctggcggcgctctcacaggcttcgctgattcacatt
aaaggggagtatgacgaagacacctttaatgaagcgtttatgatgcacacctccacctcg
ccgagctaccccattgtggcttcgatagaaacggcggcggcgatgctgcgcggcaatccc
ggaaaacggttaatcaaccgctcggtggagcgtgcgctgcatttccgcaaagaggtgcag
cgtctgcgggaagagtctgacagctggttcttcgatatctggcagccggaagaggtggat
gccgccgaatgctggcctgtcgcgccgggggaggagtggtacgggtttaacgacgccgac
cacgatcatatgttcctcgatccggttaaagtcaccatcctgacgccggggatggacgag
cagggaaacatgagcgacgaaggcattcccgccgcgctggtagcgaaattcctcgatgag
cgtggcgtggtggttgagaaaaccggcccttataacctgctgtttttgttcagcatcggc
attgataaaacccgggcgatggggctgctgcgcggcctgaccgaattcaagcgcgcttac
gatctcaatctgcgggttaaaaatatgttgccggatctgtacgccgaagatcccgatttc
taccgtaacatgcgtattcaggatctggcccaggggatccataagctcatccgccagcac
gatcttcccggactcatgctgcgcgcgttcgatacgctgccggagatgatgatgacaccg
catcaggcctggcagcggcagatcagaggcgacgtagagaccgtgacgctggatcaactg
gtcgggcgcgtctccgccaatatgatcctgccgtatccgccaggggtgccgctgctgatg
ccaggggaaatgatcaccgaacagagccgggcggtactcgattttcttctgatgctctgt
tcggtggggcatcactatccgggcttcgaaaccgatattcacggggcgaaacaggacgaa
gagggcgtataccgcgtacgtgtcttaaaaaacatatga
DBGET
integrated database retrieval system
