Citrobacter rodentium: ROD_03271
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Entry
ROD_03271 CDS
T01145
Symbol
lafS
Name
(GenBank) lateral flagellar sigma factor 28 protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
cro
Citrobacter rodentium
Pathway
cro02020
Two-component system
cro02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ROD_03271 (lafS)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ROD_03271 (lafS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cro03021
]
ROD_03271 (lafS)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cro02035
]
ROD_03271 (lafS)
Transcription machinery [BR:
cro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ROD_03271 (lafS)
Bacterial motility proteins [BR:
cro02035
]
Flagellar system
Flagellar assembly proteins
Stator
ROD_03271 (lafS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
UPF0122
Motif
Other DBs
NCBI-ProteinID:
CBG87109
UniProt:
D2TJY1
LinkDB
All DBs
Position
351118..351834
Genome browser
AA seq
238 aa
AA seq
DB search
MLQDAYESEEFSATPVLTPQQESHYLQAYLPLVRKVVRQLAPQCTCVIDRQDMEQTALLG
LLNAIRRYGMPDEGFAGYAIHRIRGAILDELRSLDWRPRLLRQKYHQIKDLIRDMRKQLG
REPEWQELSQTGLTPEDYLEFQQLEGAETLASLDELLSGEGHGALPEGRGLEEQFVNQEM
LSYALGQLSEKEGLVLSMYYQHDMNLKEIALVLGLTEARICQMNKKITQKIRDCLYPD
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgttacaggacgcttacgagtcagaggaattcagcgcgactcccgtgctgacgccgcag
caggaaagtcattatttacaggcttacctgccgctggtgagaaaagtggtgcggcagctt
gcgccgcagtgcacctgcgtgattgaccggcaggatatggaacaaacggcgttgctggga
ttactcaacgccattcggcgttatggcatgccggatgaaggttttgcgggctatgccatt
caccgcatccgcggggcgatcctcgatgagctgcgcagtcttgactggcggcctcgtctg
ctgcgtcaaaaatatcatcaaatcaaagacctgattcgcgatatgcgcaagcagctcggg
cgggagccggagtggcaagagctgtcgcagaccggcctgacgccggaggattatctggag
tttcagcagctggagggggcggaaacgctggccagccttgatgagctgctgagcggcgaa
gggcatggcgcgctgccggagggcagggggctcgaagagcagttcgtgaaccaggagatg
ctcagctacgccctcggacagctgagtgaaaaagaggggctggtgctctcaatgtattac
caacacgatatgaatttaaaagagatcgcgttggttttagggctgactgaagccagaatt
tgccaaatgaataaaaaaatcacgcagaaaattcgtgattgtttatatccagattaa
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