Citrobacter rodentium: ROD_03511
Help
Entry
ROD_03511 CDS
T01145
Name
(GenBank) LacI-family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cro03000
]
ROD_03511
Transcription factors [BR:
cro03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ROD_03511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
SpoIIID
HTH_Tnp_ISL3
HTH_38
HTH_3
MarR_2
HTH_23
HTH_7
Sigma54_DBD
TetR_N
HTH_IclR
HTH_24
DUF4088
HTH_26
Motif
Other DBs
NCBI-ProteinID:
CBG87133
UniProt:
D2TK03
LinkDB
All DBs
Position
381691..382722
Genome browser
AA seq
343 aa
AA seq
DB search
MDQESELNDLPEKKLATMRDVARAAGVSVSTVSRVLDERLPTSRSTSADKIRQVARELGY
RRDYVASSLRRGDTGTLGVLVPRLTDAVTAMLFEEIARAAARRGYFAIVATCGDSKEQEK
NAVESLLDRRVDGLIMSTCRLDDPLPQTLRERDVPHVLALRTDGFSPSSVGDDELGGYLA
TRHLIDLGHRDIGLIGGPDFASNARNRRKGFERAMQEAGLRIEAEWCCHSDFNIASGEQQ
GVKILSQPHRPSALFAVNDELAIGVLAAAHQQGLVIGEDLSLVGYNDIPLVSRLPVALTS
VRTPLEHIASNAVDMLLNPEINNNMRVTTPSLIPRKSTSSPRK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagaaagtgaactgaacgatttgccggaaaaaaagctggcgacaatgcgggat
gttgctcgcgctgcgggcgtgagcgtctcgaccgtttcgcgcgtactcgatgaaaggcta
cccacctcgcgcagcacctcggcagataaaattcgccaggtggcgcgagagcttggctac
cgtcgggactatgttgcttccagcctgcggcgtggcgataccggaacgcttggcgtcctg
gttcccaggctgaccgatgccgtcacggcgatgctttttgaagagatagccagggcggcg
gccaggcgaggctactttgcaattgtcgctacctgcggagatagcaaagagcaggagaaa
aacgccgttgaatcgctgctggatcgccgtgttgatgggctgatcatgtccacctgccga
ctggacgatcctttgccgcaaaccctgcgtgaacgggatgttccccacgtactggcgctg
cgcaccgacggttttagtccttcatcggtcggggacgatgagcttggcggctatctggct
acccgacacctgattgatttaggccaccgggatattggcctgattggcggccctgatttt
gcctccaacgcgcgcaaccggcgtaagggctttgagcgggcaatgcaggaagccggactc
aggatcgaagcggaatggtgttgtcattctgattttaatatcgcctcaggggagcagcag
ggagtgaagatcctcagccagccgcatcgcccgagcgcgctgtttgccgtcaatgatgag
ctggcgattggcgtcctcgcggccgcgcaccagcaggggctggtgattggcgaagatcta
tccctggtgggctacaatgatattcccctggtgagcaggctacccgtggcgctgacctcg
gtcaggacgccgctggagcatatcgccagcaatgcggttgatatgttattgaatccagag
ataaataataatatgcgggttaccacgccttcccttattcctcgtaagtctacttcgtct
ccacgtaaataa
DBGET
integrated database retrieval system
