Citrobacter rodentium: ROD_03991
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Entry
ROD_03991 CDS
T01145
Symbol
lacZ
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
cro
Citrobacter rodentium
Pathway
cro00052
Galactose metabolism
cro00511
Other glycan degradation
cro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
ROD_03991 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
ROD_03991 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
ROD_03991 (lacZ)
Enzymes [BR:
cro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
ROD_03991 (lacZ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
CBG87181
UniProt:
D2TK51
LinkDB
All DBs
Position
complement(446038..449121)
Genome browser
AA seq
1027 aa
AA seq
DB search
MNLNTDSLAAVLARRDWENPGVTQLNRLEAHPPFSSWRNADDARACRDATHKRSLNGEWR
FAWFPSPEAVPESWLTDDLQQADSVQLPSNWQMYGYDAPIYTNVTYPIPVNPPFVPSDNP
TGCYSLTFTVDDAWLREGQTRIIFDGVNSAFHLWCNGRWIGYGQDSRLPSEFDLSAFLTS
GENRLAVMVLRWCDGTYLEDQDMWRMSGIFRDVTLLHKPLTQISDLRIATHFNDDFSRAE
LAAEVRLRGELCDELRVTVQLWDGETQVGECTAPLGSEIIDERGAWHDRVSLRLKVDKPS
LWSAETPWLYRAVALLHTADGTLIEAEACDVGFREVKIENGLLLLNGKPLLIRGANRHEH
HPQNGQVMDEATMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHG
MTPMNRLSDDPDWLPAMSQRVTRMVQRDRNHPAIIIWSLGNESGHGANHDALYRWLKAED
PSRPVQYEGGGANSAATDIICPMYARVDQDQPFPAVPKWSIKKWLSMPGEQRPLILCEYA
HAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDR
QFCMDGLVFADRTPHPSLYEAKHAQQFFQFTLLPGDGMRIEVASEYLFRHSDNEILHWSI
TLDGNPVAAGEAALDIAPQGRQLIALPDIAAPDAAGQLWLTVRVEQPQATAWSPAGHISA
WQQWPLAEKLSVTIPPRAAAAPQLKVENAAFEVVVNQQRWQFCRQRGTLSQYWIADAAQL
LTPLTDQFTRAPLDNDIGISEVTRIDPNAWVERWKAAGHYRAEAQLLQCEAETLSNAVLI
TTAHAWQYQGETLFVSRKIWRIDGQGELTITVDVDVASGTPHPARVGLSCQLAQVAERVN
WLGLGPHENYPDRLSAACFDRWDLPLAEMYTPYVFPSENGLRCGTRELCYGAHRWRGDFQ
FNISRYSQKQLMETSHRHLLREENGTWLNIDGYHMGVGGDDSWSPSVSPEYQLSAGRYHY
QIVWGQK
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcaatactgattcactggccgccgtactggcccgtcgcgactgggaaaatccc
ggcgtcacgcagctcaatcgcctggaggcgcacccgccgttcagcagctggcgcaatgcc
gacgatgcccgcgcctgccgggacgctacgcacaaacgcagcctgaacggcgaatggcga
tttgcctggtttccgtcgccggaagcggtaccggagagctggctgactgacgatctgcaa
caggcggacagcgtgcagctcccctccaactggcagatgtacggttacgacgcgccgatc
tataccaacgtcacctaccccatcccggtaaacccgccttttgtgccgtcagacaatccc
accggctgttactcgctcacattcaccgttgacgacgcctggctgcgggaaggccagacg
cgaatcatttttgacggcgtgaactcggcgtttcatttatggtgcaacggacgctggatc
ggctacggccaggacagccgactgccctctgaattcgatctcagcgcttttctgacgagc
ggcgaaaaccgtctggcggtgatggtgctgcgctggtgcgacggcacgtatctggaagat
caggacatgtggcgaatgagcggcattttccgcgacgtcaccctcctgcataaaccgctt
acgcaaatcagcgatctgcggattgccacccactttaacgatgatttcagccgcgcggag
ctggccgccgaagtcagactgcgcggcgagctgtgtgacgagctgcgcgtgaccgtgcag
ctgtgggacggcgaaacgcaggtcggtgaatgcaccgccccgttgggcagcgagattatt
gacgaacgcggcgcctggcatgaccgcgtctccctgcgcctgaaggtcgataagccgtcg
ctgtggagcgctgaaacgccctggctgtaccgcgcggtggcgctgctgcacactgccgac
ggcacgctgattgaagcggaggcctgcgacgttggcttccgcgaggtcaaaattgaaaat
ggcctgctgttgctcaacggcaagccgctgctgattcgcggcgctaaccgccatgagcac
catccgcaaaacggtcaggtgatggacgaagcgacgatggtgcaggacattctgctgatg
aagcagaataactttaacgccgtgcgctgttcccattacccgaaccatccgctgtggtac
accctctgcgaccgctacggcctgtacgtggtagacgaagccaatattgaaacccacggc
atgacgccgatgaaccgcctcagcgacgatccggactggctgcccgccatgagccagcgg
gtgacgcgcatggtacagcgcgaccgtaatcatccggccattattatctggtcgctgggc
aatgagtccggtcacggcgcgaatcacgacgcgctctaccgctggctgaaggcggaagat
ccgtcacgcccggtgcagtacgaaggcggcggcgcaaacagcgcggcgacggatatcatc
tgcccgatgtatgcccgagtcgatcaggatcagccgttcccggcggtgccaaaatggtcg
atcaaaaaatggctgtcgatgccgggcgagcagcgcccgctgatcctgtgtgaatacgcc
cacgcgatgggcaacagcctcggcggattcgccaaatactggcaggcgtttcgtcagtat
ccgcgtctgcagggcggctttgtctgggactgggtcgatcagtcgctgattaagtacgat
gaaaacggcaacccgtggtcggcctacggcggcgactttggcgatacgccgaacgatcgc
cagttctgcatggacggcctggtgtttgccgaccgcacgccgcacccctcgctgtatgaa
gcgaaacacgcgcagcagtttttccagtttaccctgctgccgggcgacgggatgcgcatt
gaggtcgccagcgaatatctgttccgccacagcgacaatgagatcctgcactggtccatc
accctggacggcaacccggttgccgccggtgaagcggcgctggatatcgcaccgcaggga
cgccagcttatcgccctgcccgacattgccgctcccgacgccgcgggccagctgtggctg
acggtgcgcgtggagcagccgcaggcgaccgcgtggtcgcccgccggacacatcagcgcc
tggcagcagtggccgcttgcggaaaaactcagcgtaaccatcccgccgcgcgccgccgcc
gcgccgcagctgaaggttgaaaacgcagcctttgaggtcgttgtgaatcagcagcgctgg
cagttctgccgccagcggggcacgttgtcgcagtactggattgcggacgcagcgcagctt
ctcaccccgctcaccgaccagttcacccgcgcgccgctggataacgacatcggcatcagc
gaagtcacccgtatcgatcccaacgcctgggtcgagcgctggaaggctgccggacactac
cgcgcagaagcacagctgttgcagtgcgaggcggaaacgctctccaacgcggtgctgatt
accaccgctcacgcctggcagtatcagggagaaacgctgtttgtcagccgtaaaatctgg
cgcattgacggacagggcgaactgacgattacggtcgatgtggacgtcgccagcggcacg
ccgcatccggcgcgcgttggcctctcctgccagctcgcccaggtggcggagcgggtgaac
tggctggggctgggtccgcatgaaaactatccggatcgcctctccgccgcctgctttgac
cgctgggatctgccgcttgcggagatgtatacgccgtacgtgttcccgagcgaaaacggc
ctgcgctgcggcacccgcgaactgtgctatggcgcgcaccgctggcgcggcgacttccag
ttcaatatcagccgctatagtcagaagcagctgatggagaccagccaccgccatctgctg
cgggaagaaaacggcacatggctgaacattgatggttaccacatgggcgtgggcggcgac
gactcctggagtccgtcggtgtcgccggaataccagctcagcgcaggacgctaccactac
cagatcgtctggggccagaaataa
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