Citrobacter rodentium: ROD_04411
Help
Entry
ROD_04411 CDS
T01145
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cro03400
]
ROD_04411 (sbcC)
DNA repair and recombination proteins [BR:
cro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ROD_04411 (sbcC)
Archaeal homologous recombinant proteins
ROD_04411 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
T2SSE
ABC_tran
nSTAND3
AAA_21
cobW
AAA_15
TsaE
ABC_ATPase
MobB
NTPase_1
AAA_22
AAA_14
DUF2284
Motif
Other DBs
NCBI-ProteinID:
CBG87221
UniProt:
D2TKY0
LinkDB
All DBs
Position
complement(490048..493191)
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGDAYRAFWSQNRARNQADGNLQAPRVELARCA
DGKILADKVKDKLELTAELTGLDYGRFTRSMLLSQGQFAAFLNAEPKERAELLEELTGTE
IYGQISAMVFEQHKAARSELEKLQAQASSVALLAPEAVQALTDSLQALTDEEKQLAARQQ
SAQQQLNWLTRQNELQTQAQHRQQALLAAQSALQQAQPQLAPLSLAQPARALRPLWTRLQ
EQSAAVSRSQQQINEVKARLQSATTLRSRMRRDAQQQTAAMQAARQTLAAWLHEHDRFRV
WHSELGGWRALFAQQASDGIQRDRWRQRLAADTQKLAALPVLTLNMTPDEVAVALAQHAS
QRPLRQRLLALHGQIAPRLQRLAQLQEVLAQSRQALAQRTALLEAKRQQYKEKNQHYQDV
KTLCEQEERIKDLESQRALLQSGQPCPLCGSTSHPAVAAYQALELSVNQARRDALEKEVK
TLADEGAALRGQCDALRQQLQRDESEAQALAKDEQALTVEWQALISNLNITLQPQDDIQP
WLTAQEDHEKQLYQLSQRHDLQAQIAAHQQQVTQFSQQIEQRQATLTAQLSHYALSLPEE
GAEETWLSDRAAEAQTWQQKQDELNELQSRIAQLAPLLDTLPATDAAAEDGAPVALDNWR
QVHDDCLSLQSQLQTLQQQAVLEQQRASDAQAQFAAALESSIFADQSAFLAALLDDEAIA
RLEQLSQTLESQIQQAQTLATQSAQALAAHQQQPPGFLDCALSVEEIAQALTLLNQQLRD
NASRQGEIRQQLKQDADNRQQQQSLMRQIDSASQQVDDWGYLNTLIGSKEGDKFRKFAQG
LTLDNLVWLANNQLTRLHGRYLLQRKVSNALELEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLDRIFAVA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcagcctgcgcctgaaaaaccttaactcgctgaaaggggaatggaaggtc
gattttacggcggagccgttcgccagcaacggcctgttcgccatcaccggtccgacagga
gccggtaaaaccaccctgctcgacgccatttgccttgcgctgtaccacaagacgccgcgt
ctgaataccgtttcacagtcgcaaaacgatctgatgacccgcgataccgccgagtgcctg
gcggaagtggagtttgaggtcaaaggcgacgcatatcgcgcattctggagccagaaccgc
gcgcgcaaccaggcggacggcaacctgcaggcgccgcgggtggagctggcgcgctgcgcc
gacggcaaaattcttgccgataaggtgaaagataaactggagctgaccgccgaactgacc
ggactggactatggccgctttacccgctcaatgctgctctcccagggacagttcgccgcc
ttccttaacgcggaaccgaaagagcgcgccgaactgctggaggagctgaccggaacggag
atttacgggcaaatctcggcgatggttttcgaacagcataaggcggcgcggagcgaactg
gagaaattacaggcgcaggccagcagcgtcgcgctgttagcgccagaggcagtgcaggcg
ctgacagacagtttgcaggcgctcactgacgaagaaaagcagttggccgccagacagcag
agtgcgcagcagcagttgaactggctgacgcgacaaaacgaacttcagacgcaggcgcag
caccgacagcaggcgctgctggcggcgcagtcggcgttacaacaggcgcagccacagctg
gcgccgctcagcctggcgcagcccgcccgggcattgcgcccgctctggacgcggcttcag
gagcaatccgcggcggtttcccgcagccaacagcagattaatgaagtaaaggctcgctta
cagagcgcaacaacgcttcgcagccgtatgcgccgcgatgcccaacaacagactgccgca
atgcaggctgcccggcagactcttgccgcctggctgcacgaacatgaccggttccgcgta
tggcacagtgaactgggcggctggcgggccttgttcgcccagcaggccagcgacggcatt
cagcgggacagatggcggcaacgactggcggcagatacccaaaagctggcggcgttaccg
gtgctgacgctgaatatgacgccggatgaagtcgccgtcgcgctggcgcagcacgccagc
cagcgcccgctgcgccagcgtctgcttgcgctccacggtcagatcgcccccaggcttcag
cgtctggcgcagcttcaggaggtccttgcgcagagcaggcaggcgctggcgcagcgcacg
gcgttactggaggcgaagcgccagcaatacaaagagaaaaaccagcattaccaggacgtc
aaaaccctctgcgagcaggaagaacggataaaagatcttgaaagccagcgcgcgctgtta
cagtccggccagccctgtccgctctgtggctcaacgtcgcacccggcggtggcggcgtat
caggcgcttgagcttagcgtcaatcaggcgcggcgggatgcgctggaaaaagaggtcaaa
acgctggccgatgaaggcgcggccctgcgcggacagtgcgacgcgttgcgccagcagcta
cagcgcgacgaaagcgaagcgcaggcgctcgctaaagatgagcaagcgctcactgtcgag
tggcaggcgctgataagcaacctgaatatcacgctgcaaccgcaggatgatattcagccc
tggctgacggcgcaggaggatcatgagaagcagctttaccagctcagccagcgccatgat
ttacaggcgcaaatcgccgcgcatcaacagcaggtgacgcagttcagccagcaaatcgaa
cagcgtcaggcgacgctgacagcgcaactgagccactatgccctcagcctgccggaagaa
ggggcggaggagacctggttaagcgaccgcgccgcagaggcgcagacgtggcagcaaaaa
caggacgagctgaacgaactgcaatcgcgtatcgcgcagttggccccgctgctcgacacc
ctgccggctaccgacgccgccgcggaagatggcgcgccggtggcactggacaactggcgt
caggtgcacgacgactgcctgtcgctgcaaagccagttgcagacgctgcaacagcaggcg
gtactggagcagcagcgcgccagcgacgcgcaggcgcagtttgcggcggcgctggaaagc
agtatttttgccgaccagagcgcgttcctcgccgcgctgctggatgacgaggccatcgcg
cgccttgagcagctcagccagacgctggaaagccagatccagcaggcgcaaacgctcgcc
acccagagcgcgcaggcgctggcggcccatcagcaacagccgcctggctttctggattgc
gcgctgtcggttgaggagatcgcgcaggcgctcaccctgctcaaccaacagctgcgcgat
aacgccagccgtcagggtgagattcgccagcagctgaagcaggatgcggacaaccgacag
caacagcagagcctgatgcggcaaatcgacagcgccagccagcaggttgatgactggggc
tatctgaacacgcttatcggttcaaaagagggcgataaattccgtaaattcgcccagggg
ctgacgctggataatctggtctggctggcgaataaccagctgacgcggctgcatggccgc
tatttgttacagcgcaaagtcagcaacgcgctggagcttgaggtggtggacacctggcag
gcggacgccgtgcgcgacacccgcaccctctccggcggcgaaagtttcctcgtcagcctc
gcgctggcgctggcgctctccgatctggtgagccacaaaacgcggattgactcgctgttc
cttgatgaaggcttcggcaccctcgacagcgaaacgctggatacggcgcttgatgcgctc
gacgcgctgaacgccagcgggaagaccatcggcgtgattagccacgtggaggcgatgaaa
gagcgcattccggtgcagattaaagtgaaaaaaatcaacgggcttggttacagtaagctc
gaccggatatttgcggtggcgtag
DBGET
integrated database retrieval system
